RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 TNFAIP1Q13829 316 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 FKBP1CQ5VVH2 108 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 ZSCAN25Q6NSZ9 544 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 CERS3Q8IU89 383 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
SNF8-215ENST00000515572 PPP2R3BQ9Y5P8 575 aa14.43□□□□□ -0.1
SNF8-215ENST00000515572 CLRN2A0PK11 232 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 BAG3O95817 575 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 PLCG2P16885 1265 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 BTDP43251 543 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 TNNI2P48788 182 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 LRRFIP1Q32MZ4 808 aaKnown RBP14.42□□□□□ -0.1
SNF8-215ENST00000515572 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 MAGEB6Q8N7X4 407 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
SNF8-215ENST00000515572 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
SNF8-215ENST00000515572 PASKQ96RG2 1323 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 FOCADQ5VW36 1801 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 PDE6AP16499 860 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 CYP7A1P22680 504 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 CDC42EP5Q6NZY7 148 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 USP48Q86UV5 1035 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 TICAM2Q86XR7 235 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
SNF8-215ENST00000515572 VEZTQ9HBM0 779 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 USP40Q9NVE5 1235 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 CDK5RAP2Q96SN8 1893 aa14.41□□□□□ -0.1
SNF8-215ENST00000515572 ADM5C9JUS6 153 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 ZFYP08048 801 aaPredicted RBP14.4□□□□□ -0.1
SNF8-215ENST00000515572 PDE4AP27815 886 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 ADD2P35612 726 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 PPP4CP60510 307 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 UBE3CQ15386 1083 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 FAM83AQ86UY5 434 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 EVI5LQ96CN4 794 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 DEFB129Q9H1M3 183 aa14.4□□□□□ -0.1
SNF8-215ENST00000515572 TCRBV5S4A2TA0A5A2 114 aa14.39□□□□□ -0.11
SNF8-215ENST00000515572 TRAF5O00463 557 aa14.39□□□□□ -0.11
SNF8-215ENST00000515572 ADGRA1Q86SQ6 560 aa14.39□□□□□ -0.11
SNF8-215ENST00000515572 IDI2Q9BXS1 227 aa14.39□□□□□ -0.11
SNF8-215ENST00000515572 ZNF532Q9HCE3 1301 aa14.39□□□□□ -0.11
SNF8-215ENST00000515572 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
SNF8-215ENST00000515572 TCP10L2B9ZVM9 353 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
SNF8-215ENST00000515572 NF2P35240 595 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 CACNB3P54284 484 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 RHBDL3P58872 404 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 RASA3Q14644 834 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 CDCA5Q96FF9 252 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
SNF8-215ENST00000515572 AATFQ9NY61 560 aaKnown RBP eCLIP14.38□□□□□ -0.11
SNF8-215ENST00000515572 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 ENTPD3O75355 529 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 APLP1P51693 650 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 SUPT20HL1Q3ZLR7 823 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 FAM151AQ8WW52 585 aa14.37□□□□□ -0.11
SNF8-215ENST00000515572 SCAF8Q9UPN6 1271 aaKnown RBP14.37□□□□□ -0.11
SNF8-215ENST00000515572 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 TMEM88BA6NKF7 163 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 RNF113AO15541 343 aaKnown RBP14.36□□□□□ -0.11
SNF8-215ENST00000515572 WDHD1O75717 1129 aaPredicted RBP14.36□□□□□ -0.11
SNF8-215ENST00000515572 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 TEX11Q8IYF3 940 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 SH3RF3Q8TEJ3 882 aaPredicted RBP14.36□□□□□ -0.11
SNF8-215ENST00000515572 APPBP2Q92624 585 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 HOOK2Q96ED9 719 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 FAM198AQ9UFP1 575 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
SNF8-215ENST00000515572 COL2A1P02458 1487 aaPredicted RBP14.36□□□□□ -0.11
SNF8-215ENST00000515572 MYH1P12882 1939 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 CELF2O95319 508 aaKnown RBP14.35□□□□□ -0.11
SNF8-215ENST00000515572 HSPA6P17066 643 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 RGS3P49796 1198 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 FKBP1BP68106 108 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 NFIAQ12857 509 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 RILPL2Q969X0 211 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 RIOK1Q9BRS2 568 aaKnown RBP14.35□□□□□ -0.11
SNF8-215ENST00000515572 ZNF408Q9H9D4 720 aa14.35□□□□□ -0.11
SNF8-215ENST00000515572 NAV1Q8NEY1 1877 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 DYNLL1P63167 89 aaKnown RBP14.34□□□□□ -0.11
SNF8-215ENST00000515572 FMR1Q06787 632 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNF8-215ENST00000515572 TCP10Q12799 353 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 PICALMQ13492 652 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 PRAMEF18Q5VWM3 479 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 CST9Q5W186 159 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 DLK2Q6UY11 383 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 C2orf69Q8N8R5 385 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 AIDAQ96BJ3 306 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 TEPSINQ96N21 525 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 CRNKL1Q9BZJ0 848 aaKnown RBP14.34□□□□□ -0.11
SNF8-215ENST00000515572 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 CREBZFQ9NS37 354 aa14.34□□□□□ -0.11
SNF8-215ENST00000515572 HIP1O00291 1037 aa14.33□□□□□ -0.12
SNF8-215ENST00000515572 OSBPL5Q9H0X9 879 aaPredicted RBP14.33□□□□□ -0.12
SNF8-215ENST00000515572 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
SNF8-215ENST00000515572 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms