RNA–Protein interactions for RNA: ENST00000514951.5

SMN1-209, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2 BASIC

Gene SMN1, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-209ENST00000514951 MAP3K12Q12852 859 aa23.24■■□□□ 1.31
SMN1-209ENST00000514951 NAA16Q6N069 864 aaPredicted RBP23.24■■□□□ 1.31
SMN1-209ENST00000514951 PAXIP1Q6ZW49 1069 aaPredicted RBP23.24■■□□□ 1.31
SMN1-209ENST00000514951 ADGRA1Q86SQ6 560 aa23.24■■□□□ 1.31
SMN1-209ENST00000514951 SLF2Q8IX21 1173 aa23.24■■□□□ 1.31
SMN1-209ENST00000514951 TDRD3Q9H7E2 651 aaKnown RBP23.24■■□□□ 1.31
SMN1-209ENST00000514951 CLRN2A0PK11 232 aa23.23■■□□□ 1.31
SMN1-209ENST00000514951 TRAF5O00463 557 aa23.23■■□□□ 1.31
SMN1-209ENST00000514951 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
SMN1-209ENST00000514951 MAGEB6Q8N7X4 407 aa23.23■■□□□ 1.31
SMN1-209ENST00000514951 PITPNM2Q9BZ72 1349 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 GPR75-ASB3A0A0A6YYF3 556 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 PDE6AP16499 860 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 VEGFBP49765 207 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 COL13A1Q5TAT6 717 aaPredicted RBP23.22■■□□□ 1.31
SMN1-209ENST00000514951 SKAP1Q86WV1 359 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 KBTBD3Q8NAB2 608 aa23.22■■□□□ 1.31
SMN1-209ENST00000514951 ZNF70Q9UC06 446 aaPredicted RBP23.22■■□□□ 1.31
SMN1-209ENST00000514951 MYO1BO43795 1136 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 LDHCP07864 332 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 CYP7A1P22680 504 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 DEFB115Q30KQ5 88 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 SLC9C2Q5TAH2 1124 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 CDC42EP5Q6NZY7 148 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 DCPSQ96C86 337 aaKnown RBP23.21■■□□□ 1.31
SMN1-209ENST00000514951 GLIS2Q9BZE0 524 aaPredicted RBP23.21■■□□□ 1.31
SMN1-209ENST00000514951 SCAF8Q9UPN6 1271 aaKnown RBP23.21■■□□□ 1.31
SMN1-209ENST00000514951 PCNTO95613 3336 aa23.21■■□□□ 1.31
SMN1-209ENST00000514951 TCRBV5S4A2TA0A5A2 114 aa23.2■■□□□ 1.3
SMN1-209ENST00000514951 CHGBP05060 677 aa23.2■■□□□ 1.3
SMN1-209ENST00000514951 BTDP43251 543 aa23.2■■□□□ 1.3
SMN1-209ENST00000514951 TMED8Q6PL24 325 aaPredicted RBP23.2■■□□□ 1.3
SMN1-209ENST00000514951 TRPM7Q96QT4 1865 aa23.2■■□□□ 1.3
SMN1-209ENST00000514951 ADM5C9JUS6 153 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 GRM1Q13255 1194 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 SLFNL1Q499Z3 407 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 DLK2Q6UY11 383 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 KRT26Q7Z3Y9 468 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 ZNF408Q9H9D4 720 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 ZNF532Q9HCE3 1301 aa23.19■■□□□ 1.3
SMN1-209ENST00000514951 RASSF10A6NK89 507 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 ADD2P35612 726 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 CACNB3P54284 484 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 RHBDL3P58872 404 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 CDC37L1Q7L3B6 337 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 USP48Q86UV5 1035 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
SMN1-209ENST00000514951 AIDAQ96BJ3 306 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.18■■□□□ 1.3
SMN1-209ENST00000514951 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 USP40Q9NVE5 1235 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 AK9Q5TCS8 1911 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 CDK5RAP2Q96SN8 1893 aa23.18■■□□□ 1.3
SMN1-209ENST00000514951 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
SMN1-209ENST00000514951 SULF1Q8IWU6 871 aa23.17■■□□□ 1.3
SMN1-209ENST00000514951 EVI5LQ96CN4 794 aa23.17■■□□□ 1.3
SMN1-209ENST00000514951 AATFQ9NY61 560 aaKnown RBP eCLIP23.17■■□□□ 1.3
SMN1-209ENST00000514951 PPP4CP60510 307 aa23.16■■□□□ 1.3
SMN1-209ENST00000514951 TTC22Q5TAA0 569 aa23.16■■□□□ 1.3
SMN1-209ENST00000514951 MIGA1Q8NAN2 632 aa23.16■■□□□ 1.3
SMN1-209ENST00000514951 FOCADQ5VW36 1801 aa23.15■■□□□ 1.3
SMN1-209ENST00000514951 CELF2O95319 508 aaKnown RBP23.15■■□□□ 1.3
SMN1-209ENST00000514951 GSPT1P15170 499 aaKnown RBP23.15■■□□□ 1.3
SMN1-209ENST00000514951 DYNLL1P63167 89 aaKnown RBP23.15■■□□□ 1.3
SMN1-209ENST00000514951 NFIAQ12857 509 aa23.15■■□□□ 1.3
SMN1-209ENST00000514951 UBE3CQ15386 1083 aa23.15■■□□□ 1.3
SMN1-209ENST00000514951 TNS4Q8IZW8 715 aa23.15■■□□□ 1.3
SMN1-209ENST00000514951 FSD1Q9BTV5 496 aa23.15■■□□□ 1.3
SMN1-209ENST00000514951 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
SMN1-209ENST00000514951 TCP10L2B9ZVM9 353 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 WDHD1O75717 1129 aaPredicted RBP23.14■■□□□ 1.3
SMN1-209ENST00000514951 BAG3O95817 575 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 FKBP1CQ5VVH2 108 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 CST9Q5W186 159 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 ZSCAN25Q6NSZ9 544 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.3
SMN1-209ENST00000514951 RIOK1Q9BRS2 568 aaKnown RBP23.14■■□□□ 1.3
SMN1-209ENST00000514951 DEFB129Q9H1M3 183 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 TMOD2Q9NZR1 351 aa23.14■■□□□ 1.3
SMN1-209ENST00000514951 TRIM6-TRIM34B2RNG4 842 aa23.13■■□□□ 1.29
SMN1-209ENST00000514951 RNF113AO15541 343 aaKnown RBP23.13■■□□□ 1.29
SMN1-209ENST00000514951 NOL10Q9BSC4 688 aaKnown RBP23.13■■□□□ 1.29
SMN1-209ENST00000514951 IDI2Q9BXS1 227 aa23.13■■□□□ 1.29
SMN1-209ENST00000514951 FAM198AQ9UFP1 575 aa23.13■■□□□ 1.29
SMN1-209ENST00000514951 FOXN1O15353 648 aa23.12■■□□□ 1.29
SMN1-209ENST00000514951 ZFYP08048 801 aaPredicted RBP23.12■■□□□ 1.29
SMN1-209ENST00000514951 TNFAIP1Q13829 316 aa23.12■■□□□ 1.29
SMN1-209ENST00000514951 RASA3Q14644 834 aa23.12■■□□□ 1.29
SMN1-209ENST00000514951 PRAMEF18Q5VWM3 479 aa23.12■■□□□ 1.29
SMN1-209ENST00000514951 CYP4F22Q6NT55 531 aa23.12■■□□□ 1.29
SMN1-209ENST00000514951 MAGEB6P1A0A0J9YX57 407 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 ECE1P42892 770 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 FAM83AQ86UY5 434 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 RILPL2Q969X0 211 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 CDCA5Q96FF9 252 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 CAPNS2Q96L46 248 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 DDX4Q9NQI0 724 aaKnown RBP23.11■■□□□ 1.29
SMN1-209ENST00000514951 PPP2R3BQ9Y5P8 575 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 TLL2Q9Y6L7 1015 aa23.11■■□□□ 1.29
SMN1-209ENST00000514951 PLCG2P16885 1265 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms