RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
PRPF40B-203ENST00000508736 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-203ENST00000508736 DTNBO60941 627 aa13.54□□□□□ -0.24
PRPF40B-203ENST00000508736 RESTQ13127 1097 aa13.54□□□□□ -0.24
PRPF40B-203ENST00000508736 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
PRPF40B-203ENST00000508736 TAF1P21675 1872 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 LRRC2Q9BYS8 371 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 LRP2BPQ9P2M1 347 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 TPM2P07951 284 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 GYG1P46976 350 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 TRDNQ13061 729 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 GRAPQ13588 217 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 GRAPLQ8TC17 118 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 TNMDQ9H2S6 317 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
PRPF40B-203ENST00000508736 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 NPHP1O15259 732 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 KDM4AO75164 1064 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 MBD4O95243 580 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 HAND2P61296 217 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 FAM173BQ6P4H8 233 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 IFNL3Q8IZI9 196 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 NBPF3Q9H094 633 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 TIAM2Q8IVF5 1701 aa13.52□□□□□ -0.25
PRPF40B-203ENST00000508736 IRS2Q9Y4H2 1338 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 PRC1O43663 620 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 ADCY5O95622 1261 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 APPP05067 770 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 MMP10P09238 476 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 ZNF396Q96N95 335 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 NACAP1Q9BZK3 213 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 NAP1L2Q9ULW6 460 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
PRPF40B-203ENST00000508736 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 DHX16O60231 1041 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 LIG1P18858 919 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 TERF1P54274 439 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 ST5P78524 1137 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 NAPBQ9H115 298 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 CLSTN2Q9H4D0 955 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 SALL1Q9NSC2 1324 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 ANTXR2P58335 489 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 DDR1Q08345 913 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 C15orf52Q6ZUT6 534 aaKnown RBP13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 TBC1D10CQ8IV04 446 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 RGS22Q8NE09 1264 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 ARMT1Q9H993 441 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 DACT1Q9NYF0 836 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 CACNA1SQ13698 1873 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
PRPF40B-203ENST00000508736 POLRMTO00411 1230 aaKnown RBP13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 SERPINB2P05120 415 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 TPM3P06753 285 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 CYP7A1P22680 504 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 TYRO3Q06418 890 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 LCORLQ8N3X6 602 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 CCDC24Q8N4L8 307 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 TMEM87BQ96K49 555 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 CNNM2Q9H8M5 875 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 PARP3Q9Y6F1 533 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 XDHP47989 1333 aa13.49□□□□□ -0.25
PRPF40B-203ENST00000508736 CHD4Q14839 1912 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 KLRG2A4D1S0 409 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 GOLGA6L6A8MZA4 724 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 CAVIN2O95810 425 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 CCT2P78371 535 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 RBM43Q6ZSC3 357 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 MTFR1LQ9H019 292 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 RAI14Q9P0K7 980 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 ABCF2Q9UG63 623 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 SASS6Q6UVJ0 657 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 CHST3Q7LGC8 479 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
PRPF40B-203ENST00000508736 RIOK1Q9BRS2 568 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms