RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DZIP1LQ8IYY4 767 aaKnown RBP9.36□□□□□ -0.91
VCAN-207ENST00000507162 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
VCAN-207ENST00000507162 COA7Q96BR5 231 aa9.36□□□□□ -0.91
VCAN-207ENST00000507162 TTYH1Q9H313 450 aaPredicted RBP9.36□□□□□ -0.91
VCAN-207ENST00000507162 GREM2Q9H772 168 aa9.36□□□□□ -0.91
VCAN-207ENST00000507162 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
VCAN-207ENST00000507162 DBF4Q9UBU7 674 aaPredicted RBP9.36□□□□□ -0.91
VCAN-207ENST00000507162 LAMB1P07942 1786 aa9.36□□□□□ -0.91
VCAN-207ENST00000507162 DNAH12Q6ZR08 3092 aa9.36□□□□□ -0.91
VCAN-207ENST00000507162 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 CTSWP56202 376 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 TRIM32Q13049 653 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 SHHQ15465 462 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 IL27Q8NEV9 243 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 ADAMTS19Q8TE59 1207 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 UHRF1Q96T88 793 aaPredicted RBP9.35□□□□□ -0.91
VCAN-207ENST00000507162 MPHOSPH8Q99549 860 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 CWC25Q9NXE8 425 aaPredicted RBP9.35□□□□□ -0.91
VCAN-207ENST00000507162 TTF2Q9UNY4 1162 aaKnown RBP9.35□□□□□ -0.91
VCAN-207ENST00000507162 HCN4Q9Y3Q4 1203 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 LAS1LQ9Y4W2 734 aaKnown RBP9.35□□□□□ -0.91
VCAN-207ENST00000507162 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
VCAN-207ENST00000507162 MYO9BQ13459 2157 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 PFASO15067 1338 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 TAF5LO75529 589 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 GABBR2O75899 941 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 INPP5BP32019 993 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 CACNB3P54284 484 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 CCDC191Q8NCU4 936 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 C1QTNF1Q9BXJ1 281 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 OGDHLQ9ULD0 1010 aa9.34□□□□□ -0.91
VCAN-207ENST00000507162 OTOFQ9HC10 1997 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 HMGCRP04035 888 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 CRKP46108 304 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 RIPK4P57078 832 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 FKBP1AP62942 108 aaKnown RBP9.33□□□□□ -0.92
VCAN-207ENST00000507162 CHRNDQ07001 517 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 MOGSQ13724 837 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 ZNF804AQ7Z570 1209 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 ASB2Q96Q27 587 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 TIMELESSQ9UNS1 1208 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
VCAN-207ENST00000507162 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 IL1R1P14778 569 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 GRIN2CQ14957 1233 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 MFSD14BQ5SR56 506 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 C9orf50Q5SZB4 431 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 DCAF15Q66K64 600 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 GADL1Q6ZQY3 521 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 SMCR8Q8TEV9 937 aaPredicted RBP9.32□□□□□ -0.92
VCAN-207ENST00000507162 ATXN2LQ8WWM7 1075 aaKnown RBP9.32□□□□□ -0.92
VCAN-207ENST00000507162 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 ZNF341Q9BYN7 854 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
VCAN-207ENST00000507162 BABAM1Q9NWV8 329 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 DOCK3Q8IZD9 2030 aa9.32□□□□□ -0.92
VCAN-207ENST00000507162 PLIN1O60240 522 aa9.31□□□□□ -0.92
VCAN-207ENST00000507162 ATN1P54259 1190 aaPredicted RBP9.31□□□□□ -0.92
VCAN-207ENST00000507162 MRPS5P82675 430 aaKnown RBP9.31□□□□□ -0.92
VCAN-207ENST00000507162 SMAD3P84022 425 aaKnown RBP9.31□□□□□ -0.92
VCAN-207ENST00000507162 LRFN3Q9BTN0 628 aa9.31□□□□□ -0.92
VCAN-207ENST00000507162 SENP6Q9GZR1 1112 aaPredicted RBP9.31□□□□□ -0.92
VCAN-207ENST00000507162 TMOD2Q9NZR1 351 aa9.31□□□□□ -0.92
VCAN-207ENST00000507162 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
VCAN-207ENST00000507162 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
VCAN-207ENST00000507162 CXCL11O14625 94 aa9.3□□□□□ -0.92
VCAN-207ENST00000507162 COL6A1P12109 1028 aa9.3□□□□□ -0.92
VCAN-207ENST00000507162 ITGA6P23229 1130 aa9.3□□□□□ -0.92
VCAN-207ENST00000507162 CCDC85BQ15834 202 aaPredicted RBP9.3□□□□□ -0.92
VCAN-207ENST00000507162 FASTKD5Q7L8L6 764 aaKnown RBP9.3□□□□□ -0.92
VCAN-207ENST00000507162 NECAB3Q96P71 396 aaPredicted RBP9.3□□□□□ -0.92
VCAN-207ENST00000507162 THEGQ9P2T0 379 aa9.3□□□□□ -0.92
VCAN-207ENST00000507162 COL2A1P02458 1487 aaPredicted RBP9.29□□□□□ -0.92
VCAN-207ENST00000507162 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
VCAN-207ENST00000507162 CYP2B6P20813 491 aa9.29□□□□□ -0.92
VCAN-207ENST00000507162 METTL22Q9BUU2 404 aaPredicted RBP9.29□□□□□ -0.92
VCAN-207ENST00000507162 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
VCAN-207ENST00000507162 ZHX2Q9Y6X8 837 aa9.29□□□□□ -0.92
VCAN-207ENST00000507162 CDH23Q9H251 3354 aa9.29□□□□□ -0.92
VCAN-207ENST00000507162 MGAMO43451 1857 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 CHL1O00533 1208 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 NEUROD2Q15784 382 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 DUSP27Q5VZP5 1158 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 C15orf52Q6ZUT6 534 aaKnown RBP9.28□□□□□ -0.92
VCAN-207ENST00000507162 BADQ92934 168 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 EPHX3Q9H6B9 360 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 PRDM5Q9NQX1 630 aaPredicted RBP9.28□□□□□ -0.92
VCAN-207ENST00000507162 DLG5Q8TDM6 1919 aa9.28□□□□□ -0.92
VCAN-207ENST00000507162 ECM29Q5VYK3 1845 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms