RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 C9orf131Q5VYM1 1079 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 GIMAP6Q6P9H5 292 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 RALYLQ86SE5 291 aaKnown RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 TXNRD3Q86VQ6 643 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 MB21D2Q8IYB1 491 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 NSUN4Q96CB9 384 aaKnown RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 MASTLQ96GX5 879 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 NAPBQ9H115 298 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 ARMT1Q9H993 441 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 NSFL1CQ9UNZ2 370 aaKnown RBP9.51□□□□□ -0.89
COL4A5-208ENST00000505728 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
COL4A5-208ENST00000505728 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 TOMM70O94826 608 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 UFL1O94874 794 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 LDHCP07864 332 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 IL1R1P14778 569 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 PDCP20941 246 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 GJB2P29033 226 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 HAND2P61296 217 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 GSTO1P78417 241 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 ST3GAL1Q11201 340 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 CHAF1AQ13111 956 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 PKP1Q13835 747 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 COL9A3Q14050 684 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 DALRD3Q5D0E6 543 aaKnown RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 TBC1D16Q8TBP0 767 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 BRF1Q92994 677 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 GTF3C6Q969F1 213 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 KRT23Q9C075 422 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 TMX4Q9H1E5 349 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 CD209Q9NNX6 404 aa9.5□□□□□ -0.89
COL4A5-208ENST00000505728 COL1A1P02452 1464 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-208ENST00000505728 FER1L6Q2WGJ9 1857 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 PRC1O43663 620 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 STX6O43752 255 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 TDO2P48775 406 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 MECOMQ03112 1051 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 AKNAD1Q5T1N1 836 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 STYK1Q6J9G0 422 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 MPNDQ8N594 471 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 DNAJC5GQ8N7S2 189 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 NECAB1Q8N987 351 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 MIGA1Q8NAN2 632 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 TMEM87BQ96K49 555 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 MTA3Q9BTC8 594 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 RNF41Q9H4P4 317 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-208ENST00000505728 CNNM2Q9H8M5 875 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 EPB41L4AQ9HCS5 686 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-208ENST00000505728 POLLQ9UGP5 575 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 ATP6V1DQ9Y5K8 247 aa9.49□□□□□ -0.89
COL4A5-208ENST00000505728 H0YIN7 160 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 C6orf229H3BNL8 230 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 PRKAB2O43741 272 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 TRAK2O60296 914 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 LDHBP07195 334 aaKnown RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 ZSCAN22P10073 491 aaPredicted RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 SYT1P21579 422 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 APLP1P51693 650 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 PRELPP51888 382 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 HMGN5P82970 282 aaKnown RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 RASSF7Q02833 373 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 APOBRQ0VD83 1088 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 MFSD6Q6ZSS7 791 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 ADGRA1Q86SQ6 560 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 TBC1D10CQ8IV04 446 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 TBC1D22AQ8WUA7 517 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 LRRC2Q9BYS8 371 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
COL4A5-208ENST00000505728 COA1Q9GZY4 146 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 NBPF3Q9H094 633 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 ATP8A2Q9NTI2 1148 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 RNF181Q9P0P0 153 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 ANAPC4Q9UJX5 808 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 KIF3AQ9Y496 699 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 FAM205AQ6ZU69 1335 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 TCHHQ07283 1943 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 LRRC37AA6NMS7 1700 aa9.48□□□□□ -0.89
COL4A5-208ENST00000505728 BAG3O95817 575 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 PRDX5P30044 214 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 PDIA3P30101 505 aaKnown RBP9.47□□□□□ -0.89
COL4A5-208ENST00000505728 NT5C2P49902 561 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 ANTXR2P58335 489 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 PPP4CP60510 307 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 DYNLL1P63167 89 aaKnown RBP9.47□□□□□ -0.89
COL4A5-208ENST00000505728 PPARAQ07869 468 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 SCRN1Q12765 414 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 STK3Q13188 491 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 DZIP1Q86YF9 867 aaKnown RBP9.47□□□□□ -0.89
COL4A5-208ENST00000505728 C2CD5Q86YS7 1000 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
COL4A5-208ENST00000505728 SMARCC2Q8TAQ2 1214 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms