RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 MYO3BQ8WXR4 1341 aa16.06■□□□□ 0.16
SGCA-203ENST00000502555 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 ZNF213O14771 459 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 PRKAB2O43741 272 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
SGCA-203ENST00000502555 TDO2P48775 406 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 HDLBPQ00341 1268 aaKnown RBP16.05■□□□□ 0.16
SGCA-203ENST00000502555 ADCK5Q3MIX3 580 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
SGCA-203ENST00000502555 ATP8A2Q9NTI2 1148 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
SGCA-203ENST00000502555 TTF2Q9UNY4 1162 aaKnown RBP16.05■□□□□ 0.16
SGCA-203ENST00000502555 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 CHD4Q14839 1912 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 K7ELQ4 463 aaPredicted RBP16.04■□□□□ 0.16
SGCA-203ENST00000502555 BTDP43251 543 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 TAF6LQ9Y6J9 622 aa16.04■□□□□ 0.16
SGCA-203ENST00000502555 COL4A5P29400 1685 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 E7EWF7 191 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 CD2BP2O95400 341 aaKnown RBP16.03■□□□□ 0.16
SGCA-203ENST00000502555 HHIPL2Q6UWX4 724 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 SDR42E1Q8WUS8 393 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 TTC14Q96N46 770 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 MXD3Q9BW11 206 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 DAGLAQ9Y4D2 1042 aa16.03■□□□□ 0.16
SGCA-203ENST00000502555 VIL1P09327 827 aaKnown RBP16.02■□□□□ 0.16
SGCA-203ENST00000502555 RPS6KB1P23443 525 aa16.02■□□□□ 0.16
SGCA-203ENST00000502555 RSBN1LQ6PCB5 846 aaPredicted RBP16.02■□□□□ 0.16
SGCA-203ENST00000502555 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SGCA-203ENST00000502555 PDRG1Q9NUG6 133 aa16.02■□□□□ 0.16
SGCA-203ENST00000502555 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.15
SGCA-203ENST00000502555 SCN9AQ15858 1988 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 F8W031 263 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 HAND2P61296 217 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 ZDHHC15Q96MV8 337 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 SYT17Q9BSW7 474 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 ALDH8A1Q9H2A2 487 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 DCP1AQ9NPI6 582 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
SGCA-203ENST00000502555 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
SGCA-203ENST00000502555 USP5P45974 858 aa16■□□□□ 0.15
SGCA-203ENST00000502555 CRKP46108 304 aa16■□□□□ 0.15
SGCA-203ENST00000502555 RHBDL3P58872 404 aa16■□□□□ 0.15
SGCA-203ENST00000502555 ANKRD1Q15327 319 aa16■□□□□ 0.15
SGCA-203ENST00000502555 SBK1Q52WX2 424 aa16■□□□□ 0.15
SGCA-203ENST00000502555 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
SGCA-203ENST00000502555 KIAA0825Q8IV33 1275 aa16■□□□□ 0.15
SGCA-203ENST00000502555 NBPF3Q9H094 633 aa16■□□□□ 0.15
SGCA-203ENST00000502555 RNF41Q9H4P4 317 aaPredicted RBP16■□□□□ 0.15
SGCA-203ENST00000502555 PSME4Q14997 1843 aa16■□□□□ 0.15
SGCA-203ENST00000502555 PSMD14O00487 310 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 RAD17O75943 681 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 PCP11498 1178 aaKnown RBP15.99■□□□□ 0.15
SGCA-203ENST00000502555 PPARAQ07869 468 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 TRDNQ13061 729 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 DHX32Q7L7V1 743 aaKnown RBP15.99■□□□□ 0.15
SGCA-203ENST00000502555 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
SGCA-203ENST00000502555 TEX11Q8IYF3 940 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 AGBL3Q8NEM8 1001 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 NCOA7Q8NI08 942 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 STAG1Q8WVM7 1258 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 MKRN1Q9UHC7 482 aaKnown RBP15.99■□□□□ 0.15
SGCA-203ENST00000502555 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
SGCA-203ENST00000502555 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 CPA1P15085 419 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 SLC4A3P48751 1232 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 SCNN1DP51172 638 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 AK2P54819 239 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 RASSF7Q02833 373 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 TNIP1Q15025 636 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 AKNAD1Q5T1N1 836 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 CIAPIN1Q6FI81 312 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 AMOTL1Q8IY63 956 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 GMLQ99445 158 aa15.98■□□□□ 0.15
SGCA-203ENST00000502555 USP17L12C9JPN9 530 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 USP17L21D6R901 530 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 SLC3A2P08195 630 aaKnown RBP15.97■□□□□ 0.15
SGCA-203ENST00000502555 MCM5P33992 734 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 NT5C2P49902 561 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 MMP14P50281 582 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 CXCL9Q07325 125 aa15.97■□□□□ 0.15
SGCA-203ENST00000502555 APOBEC3HQ6NTF7 200 aaKnown RBP15.97■□□□□ 0.15
SGCA-203ENST00000502555 MB21D2Q8IYB1 491 aaPredicted RBP15.97■□□□□ 0.15
SGCA-203ENST00000502555 KRT23Q9C075 422 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms