RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 BRD1O95696 1058 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 LDHBP07195 334 aaKnown RBP13.58□□□□□ -0.24
HDLBP-245ENST00000494862 PRDX5P30044 214 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 TDO2P48775 406 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 GSTO1P78417 241 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 GIMAP6Q6P9H5 292 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
HDLBP-245ENST00000494862 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 BRF1Q92994 677 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 LRRC2Q9BYS8 371 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
HDLBP-245ENST00000494862 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 PRC1O43663 620 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 PFKFB2O60825 505 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 LDHCP07864 332 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 PTMSP20962 102 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
HDLBP-245ENST00000494862 PKP1Q13835 747 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
HDLBP-245ENST00000494862 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 GTF3C6Q969F1 213 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 COA1Q9GZY4 146 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 DUOX1Q9NRD9 1551 aa13.57□□□□□ -0.24
HDLBP-245ENST00000494862 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 BAG4O95429 457 aaKnown RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 PDIA4P13667 645 aaKnown RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 GJB2P29033 226 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 EVCP57679 992 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 ANTXR2P58335 489 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 AKNAD1Q5T1N1 836 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 STAG1Q8WVM7 1258 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 ZNF274Q96GC6 653 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 EYA3Q99504 573 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 CRNKL1Q9BZJ0 848 aaKnown RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 ANAPC4Q9UJX5 808 aa13.56□□□□□ -0.24
HDLBP-245ENST00000494862 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
HDLBP-245ENST00000494862 MAST2Q6P0Q8 1798 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 PPP4CP60510 307 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 APOBRQ0VD83 1088 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 CHST3Q7LGC8 479 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 SDR42E1Q8WUS8 393 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
HDLBP-245ENST00000494862 KRT23Q9C075 422 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-245ENST00000494862 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
HDLBP-245ENST00000494862 MYH13Q9UKX3 1938 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 GOLGA6L22H0YM25 854 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 RIMBP2O15034 1052 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 CHRNA5P30532 468 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 PPARAQ07869 468 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 STK3Q13188 491 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 CC2D2BQ6DHV5 1058 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 ATP8A2Q9NTI2 1148 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 AATFQ9NY61 560 aaKnown RBP eCLIP13.54□□□□□ -0.24
HDLBP-245ENST00000494862 SUGT1Q9Y2Z0 365 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 C10orf71Q711Q0 1435 aa13.54□□□□□ -0.24
HDLBP-245ENST00000494862 B4E1Z4 1266 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 STX6O43752 255 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 BAG3O95817 575 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 PDCP20941 246 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 SYT1P21579 422 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
HDLBP-245ENST00000494862 SCRN1Q12765 414 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 GRIK5Q16478 980 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 SLF2Q8IX21 1173 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-245ENST00000494862 NOL10Q9BSC4 688 aaKnown RBP13.53□□□□□ -0.24
HDLBP-245ENST00000494862 MTA3Q9BTC8 594 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 PDGFDQ9GZP0 370 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-245ENST00000494862 NEDD4P46934 1319 aa13.53□□□□□ -0.24
HDLBP-245ENST00000494862 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 SH2B2O14492 632 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 ZSCAN22P10073 491 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 SBK1Q52WX2 424 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 DCP1AQ9NPI6 582 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
HDLBP-245ENST00000494862 TACC3Q9Y6A5 838 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 MROH7-TTC4A0A0A0MT08 1334 aa13.52□□□□□ -0.25
HDLBP-245ENST00000494862 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
HDLBP-245ENST00000494862 G3V3G9 751 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms