RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 SLC39A14Q15043 492 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 METTL16Q86W50 562 aaKnown RBP9.57□□□□□ -0.88
GBP3-208ENST00000493594 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 RGS22Q8NE09 1264 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 C19orf44Q9H6X5 657 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 NFE2L3Q9Y4A8 694 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.57□□□□□ -0.88
GBP3-208ENST00000493594 EIF3JO75822 258 aaKnown RBP9.57□□□□□ -0.88
GBP3-208ENST00000493594 VSNL1P62760 191 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 GCKRQ14397 625 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 KIF4BQ2VIQ3 1234 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 HSP90B2PQ58FF3 399 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 ZNF569Q5MCW4 686 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 BRAPQ7Z569 592 aa9.57□□□□□ -0.88
GBP3-208ENST00000493594 TECPR2O15040 1411 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 ABCC6O95255 1503 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 UTYO14607 1347 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 NEURL1BA8MQ27 555 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 ERLIN1O75477 346 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 CCDC175P0C221 793 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 RXRAP19793 462 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 FMR1Q06787 632 aaKnown RBP eCLIP9.56□□□□□ -0.88
GBP3-208ENST00000493594 CASP8Q14790 479 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 LRRC31Q6UY01 552 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 DSCC1Q9BVC3 393 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 SAMSN1Q9NSI8 373 aaKnown RBP9.56□□□□□ -0.88
GBP3-208ENST00000493594 PAG1Q9NWQ8 432 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 ABL1P00519 1130 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 E2F4Q16254 413 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 CCDC102BQ68D86 513 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 RAD9BQ6WBX8 426 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 HNRNPLLQ8WVV9 542 aaKnown RBP9.56□□□□□ -0.88
GBP3-208ENST00000493594 FAM204AQ9H8W3 233 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 COPRSQ9NQ92 184 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 CDC23Q9UJX2 597 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 NCAPD2Q15021 1401 aa9.56□□□□□ -0.88
GBP3-208ENST00000493594 NWD1Q149M9 1564 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 LRRIQ3A6PVS8 624 aaPredicted RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 PRC1O43663 620 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 KIF5CO60282 957 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 COPS6Q7L5N1 327 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 UBE3BQ7Z3V4 1068 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 GPATCH11Q8N954 259 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
GBP3-208ENST00000493594 RNF216Q9NWF9 866 aaPredicted RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 HPS5Q9UPZ3 1129 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 HPSEQ9Y251 543 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 SH3TC1Q8TE82 1336 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 LAMA4Q16363 1823 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 RNMTO43148 476 aaKnown RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 TEX33O43247 280 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 PTCD1O75127 700 aaKnown RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 RFX5P48382 616 aaPredicted RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 SLC39A6Q13433 755 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 PDIA6Q15084 440 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 AKAP4Q5JQC9 854 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 VPS37DQ86XT2 251 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 CEP112Q8N8E3 955 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 XAGE3Q8WTP9 111 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 CDC5LQ99459 802 aaKnown RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 ESF1Q9H501 851 aaKnown RBP9.55□□□□□ -0.88
GBP3-208ENST00000493594 DDX21Q9NR30 783 aaKnown RBP eCLIP9.55□□□□□ -0.88
GBP3-208ENST00000493594 HELLSQ9NRZ9 838 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 RAB21Q9UL25 225 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
GBP3-208ENST00000493594 RICTORQ6R327 1708 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 MAST3O60307 1309 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 M0R2C6 588 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 USP5P45974 858 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 HSP90AB3PQ58FF7 597 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 C1orf141Q5JVX7 400 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 GRAMD1CQ8IYS0 662 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 GDAP1L1Q96MZ0 367 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 TEX13AQ9BXU3 409 aaPredicted RBP9.54□□□□□ -0.88
GBP3-208ENST00000493594 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 AKR1B15C9JRZ8 316 aaPredicted RBP9.54□□□□□ -0.88
GBP3-208ENST00000493594 RBL2Q08999 1139 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 ZMYM1Q5SVZ6 1142 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 NOA1Q8NC60 698 aaKnown RBP9.54□□□□□ -0.88
GBP3-208ENST00000493594 MSANTD4Q8NCY6 345 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 PHKBQ93100 1093 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 ALG1Q9BT22 464 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 YY1AP1Q9H869 796 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 RAI14Q9P0K7 980 aa9.54□□□□□ -0.88
GBP3-208ENST00000493594 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
GBP3-208ENST00000493594 PTPRUQ92729 1446 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 CTAGE9A4FU28 777 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 PRR29P0C7W0 189 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 LTKP29376 864 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 CORO7P57737 925 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
GBP3-208ENST00000493594 PTPAQ15257 358 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 WASHC4Q2M389 1173 aa9.53□□□□□ -0.88
GBP3-208ENST00000493594 PLEKHO1Q53GL0 409 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms