RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 RXRAP19793 462 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 CDC27P30260 824 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 GSDMDP57764 484 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 ZRSR1Q15695 479 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 CCDC112Q8NEF3 446 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 IMPACTQ9P2X3 320 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
SEMA4D-220ENST00000492386 LRP5O75197 1615 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 B4E1Z4 1266 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 APPP05067 770 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 HSPA2P54652 639 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 NCAPHQ15003 741 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 KRT40Q6A162 431 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 SLC4A9Q96Q91 983 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 CHD4Q14839 1912 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 CDKL5O76039 1030 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 CYP19A1P11511 503 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 MARCKSP29966 332 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 CCAR2Q8N163 923 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 IGDCC4Q8TDY8 1250 aa18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 XPO4Q9C0E2 1151 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-220ENST00000492386 PTPAQ15257 358 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 NTRK3Q16288 839 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 PHKBQ93100 1093 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 TMEM87BQ96K49 555 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 TIGD1Q96MW7 591 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 STRBPQ96SI9 672 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 DOCK2Q92608 1830 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 PTPN14Q15678 1187 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 IFNKQ9P0W0 207 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 HPSEQ9Y251 543 aa18.68■□□□□ 0.58
SEMA4D-220ENST00000492386 PPP6R2O75170 966 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 ALX1Q15699 326 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 MICU3Q86XE3 530 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 ZNF592Q92610 1267 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 LY9Q9HBG7 655 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 PDE8AO60658 829 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 SHC4Q6S5L8 630 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 SGMS1Q86VZ5 419 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 TUBE1Q9UJT0 475 aa18.67■□□□□ 0.58
SEMA4D-220ENST00000492386 FAM237AA0A1B0GTK4 181 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 ZBTB43O43298 467 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 RANBP6O60518 1105 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 SMC2O95347 1197 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 FGFR2P21802 821 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 SYKP43405 635 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 INCENPQ9NQS7 918 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 TRMT1Q9NXH9 659 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 BCL9O00512 1426 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 NAA30Q147X3 362 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 ARMCX5Q6P1M9 558 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 CPLX2Q6PUV4 134 aaKnown RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 HSD3B7Q9H2F3 369 aa18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 EPB41L4AQ9HCS5 686 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-220ENST00000492386 IKBKBO14920 756 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 CBX1P83916 185 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 LPIN2Q92539 896 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 SLIT2O94813 1529 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 UBN2Q6ZU65 1347 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 TIAM2Q8IVF5 1701 aa18.65■□□□□ 0.58
SEMA4D-220ENST00000492386 IARSP41252 1262 aaKnown RBP18.64■□□□□ 0.58
SEMA4D-220ENST00000492386 TMC6Q7Z403 805 aa18.64■□□□□ 0.58
SEMA4D-220ENST00000492386 HELBQ8NG08 1087 aaPredicted RBP18.64■□□□□ 0.58
SEMA4D-220ENST00000492386 MYL10Q9BUA6 226 aa18.64■□□□□ 0.58
SEMA4D-220ENST00000492386 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.58
SEMA4D-220ENST00000492386 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 TPM4P67936 248 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 TMEM67Q5HYA8 995 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 RESP18Q5W5W9 173 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 JMYQ8N9B5 988 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 MROH5Q6ZUA9 1318 aa18.64■□□□□ 0.57
SEMA4D-220ENST00000492386 PATL2C9JE40 543 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 UBE2Q2LH0YL09 131 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 LIFRP42702 1097 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 E4F1Q66K89 784 aaPredicted RBP18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 ISM2Q6H9L7 571 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 NFXL1Q6ZNB6 911 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 IFNL3Q8IZI9 196 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 PRDM10Q9NQV6 1147 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 ERVV-1B6SEH8 477 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 CTDSPL2Q05D32 466 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 GNL2Q13823 731 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 ZSWIM5Q9P217 1185 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 STK36Q9NRP7 1315 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
SEMA4D-220ENST00000492386 KAT6BQ8WYB5 2073 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms