RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 CHPFQ8IZ52 775 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 PGBD3Q8N328 593 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 USHBP1Q8N6Y0 703 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ENOX1Q8TC92 643 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 DNAAF4Q8WXU2 420 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 APPBP2Q92624 585 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 RBM33Q96EV2 1170 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 RBCK1Q9BYM8 510 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 PPCSQ9HAB8 311 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 LGR6Q9HBX8 967 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 CHST12Q9NRB3 414 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 SEPT3Q9UH03 358 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 TRPC6Q9Y210 931 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 EXOC6BQ9Y2D4 811 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 NUB1Q9Y5A7 615 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 CTDP1Q9Y5B0 961 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 LRRFIP2Q9Y608 721 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ADGRG1Q9Y653 693 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 PLEKHG2Q9H7P9 1386 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 ADAMTSL3P82987 1691 aa4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 N4BP2Q86UW6 1770 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-206ENST00000492233 USP42Q9H9J4 1324 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 BTBD11A6QL63 1104 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 TREHO43280 583 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 TSPAN6O43657 245 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ALDH1L1O75891 902 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 BAG4O95429 457 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 XRCC6P12956 609 aaKnown RBP eCLIP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 TERF1P54274 439 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 EXOSC10Q01780 885 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ATP2B2Q01814 1243 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 RASSF7Q02833 373 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 EN1Q05925 392 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 TEFQ10587 303 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 NR1H3Q13133 447 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 CUL4AQ13619 759 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 NR6A1Q15406 480 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 PUS10Q3MIT2 529 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 BRDTQ58F21 947 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ESCO1Q5FWF5 840 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 KSR2Q6VAB6 950 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 PPP1R42Q7Z4L9 355 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 OGFOD1Q8N543 542 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 CCDC89Q8N998 374 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 FAM174AQ8TBP5 190 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 RHPN1Q8TCX5 695 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ANKRD24Q8TF21 1146 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 KIF1BPQ96EK5 621 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ZNF594Q96JF6 807 aaPredicted RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 TSPAN18Q96SJ8 248 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 MKNK1Q9BUB5 465 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 PHAXQ9H814 394 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 CYLDQ9NQC7 956 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 SIRPGQ9P1W8 387 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 HDAC5Q9UQL6 1122 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 NOD1Q9Y239 953 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 LZTS1Q9Y250 596 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ADCY9O60503 1353 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 C1orf167Q5SNV9 1468 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 CAMTA1Q9Y6Y1 1673 aa4.47□□□□□ -1.69
ATPAF1-206ENST00000492233 ABCC6O95255 1503 aa4.46□□□□□ -1.69
ATPAF1-206ENST00000492233 CACNA1FO60840 1977 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 LMO7Q8WWI1 1683 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 PXDNQ92626 1479 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 PI4KAP2A4QPH2 592 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 GOLGA6L22H0YM25 854 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 KCNQ3O43525 872 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 SURF6O75683 361 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 RGS20O76081 388 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 ATF3P18847 181 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 NFE2Q16621 373 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 KLHL40Q2TBA0 621 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 C1orf141Q5JVX7 400 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 CC2D1AQ6P1N0 951 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 PADI6Q6TGC4 694 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 HOMER1Q86YM7 354 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 SLF2Q8IX21 1173 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 TTC30BQ8N4P2 665 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 PI4KAP1Q8N8J0 262 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 TEX19Q8NA77 164 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 PI4K2BQ8TCG2 481 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 SH3TC2Q8TF17 1288 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 INTS4Q96HW7 963 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 ORAI2Q96SN7 254 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 TRIM55Q9BYV6 548 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 KANSL2Q9H9L4 492 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 IFT122Q9HBG6 1241 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 DBF4Q9UBU7 674 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 NOL7Q9UMY1 257 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 UTYO14607 1347 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 TTC41PQ6P2S7 1318 aa4.46□□□□□ -1.7
ATPAF1-206ENST00000492233 SETD1BQ9UPS6 1966 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms