RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 NSD3Q9BZ95 1437 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 BRD1O95696 1058 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 COL23A1Q86Y22 540 aaPredicted RBP8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 VWA5B2Q8N398 1253 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 IRF7Q92985 503 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 MAP2P11137 1827 aaKnown RBP8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 TAF1LQ8IZX4 1826 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 PCDH11XQ9BZA7 1347 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 PCDH11YQ9BZA8 1340 aa8.74□□□□□ -1.01
TNFSF4-203ENST00000488053 C16orf46Q6P387 395 aa8.73□□□□□ -1.01
TNFSF4-203ENST00000488053 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
TNFSF4-203ENST00000488053 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
TNFSF4-203ENST00000488053 PALLDQ8WX93 1383 aa8.73□□□□□ -1.01
TNFSF4-203ENST00000488053 CYP27B1O15528 508 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 SMIM5Q71RC9 77 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 GTPBP3Q969Y2 492 aaKnown RBP8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
TNFSF4-203ENST00000488053 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.01
TNFSF4-203ENST00000488053 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 ARID4AP29374 1257 aaPredicted RBP8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 TNNT2P45379 298 aaPredicted RBP8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 COX20Q5RI15 118 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 CAPN12Q6ZSI9 719 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 SUSD3Q96L08 255 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 PCGF6Q9BYE7 350 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 SEPT3Q9UH03 358 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 PHF24Q9UPV7 400 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 C4BP0C0L5 1744 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
TNFSF4-203ENST00000488053 WFS1O76024 890 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 THBS1P07996 1170 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 DGKZQ13574 1117 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 IER5Q5VY09 327 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 AMIGO3Q86WK7 504 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 HSH2DQ96JZ2 352 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 ZCCHC2Q9C0B9 1178 aaKnown RBP8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 WWC3Q9ULE0 1092 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 KIF24Q5T7B8 1368 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 UBR3Q6ZT12 1888 aa8.7□□□□□ -1.02
TNFSF4-203ENST00000488053 TGFBR3LH3BV60 316 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 FAM157BP0CG42 384 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 UBAP2LQ14157 1087 aaKnown RBP8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 PIGBQ92521 554 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 SAP130Q9H0E3 1048 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 ATXN7L1Q9ULK2 861 aaPredicted RBP8.69□□□□□ -1.02
TNFSF4-203ENST00000488053 PATL2C9JE40 543 aaKnown RBP8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 SCNN1AP37088 669 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 C1QTNF8P60827 252 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 TREML4Q6UXN2 200 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 CCER1Q8TC90 406 aaPredicted RBP8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 GTF3C2Q8WUA4 911 aaPredicted RBP8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 LRFN2Q9ULH4 789 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 ERBB4Q15303 1308 aa8.68□□□□□ -1.02
TNFSF4-203ENST00000488053 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 KCNA1Q09470 495 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 NCAPD2Q15021 1401 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 WASHC2AQ641Q2 1341 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 KLRG1Q96E93 195 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 NDFIP2Q9NV92 336 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 POLKQ9UBT6 870 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 ASAP1Q9ULH1 1129 aa8.67□□□□□ -1.02
TNFSF4-203ENST00000488053 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 GPR25O00155 361 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 PHKG2P15735 406 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 SIK1P57059 783 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 ITPK1Q13572 414 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 LAMC2Q13753 1193 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 FLAD1Q8NFF5 587 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 CEP63Q96MT8 703 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 STIM2Q9P246 746 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
TNFSF4-203ENST00000488053 DCDC2BA2VCK2 349 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 TNFRSF10BO14763 440 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 BNIP3LO60238 219 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 GRIN3BO60391 1043 aa8.65□□□□□ -1.02
TNFSF4-203ENST00000488053 TNP2Q05952 138 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms