RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	JMY	Q8N9B5	988 aa		11.28	□□□□□ -0.6
ZNF3-215	ENST00000487620	TIGD1	Q96MW7	591 aa		11.28	□□□□□ -0.6
ZNF3-215	ENST00000487620	FANCL	Q9NW38	375 aa		11.28	□□□□□ -0.6
ZNF3-215	ENST00000487620	TUBE1	Q9UJT0	475 aa		11.28	□□□□□ -0.6
ZNF3-215	ENST00000487620	FHOD1	Q9Y613	1164 aa		11.28	□□□□□ -0.6
ZNF3-215	ENST00000487620	ZMYM6	O95789	1325 aa		11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	PHLPP2	Q6ZVD8	1323 aa		11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	PROSER2	Q86WR7	435 aa	Predicted RBP	11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	NKX2-3	Q8TAU0	364 aa		11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	NOL10	Q9BSC4	688 aa	Known RBP	11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	ATG3	Q9NT62	314 aa		11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	ANGEL1	Q9UNK9	670 aa	Known RBP	11.27	□□□□□ -0.6
ZNF3-215	ENST00000487620	DDX60	Q8IY21	1712 aa	Known RBP	11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	PNMA6A	P0CW24	399 aa	Predicted RBP	11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	SPECC1	Q5M775	1068 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	TRIM65	Q6PJ69	517 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	CYB5R4	Q7L1T6	521 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	PDILT	Q8N807	584 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	CNNM3	Q8NE01	707 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	CARD6	Q9BX69	1037 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMX1	Q9H3N1	280 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	HPSE	Q9Y251	543 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	GLI3	P10071	1580 aa		11.27	□□□□□ -0.61
ZNF3-215	ENST00000487620	FANCG	O15287	622 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	PPP6R2	O75170	966 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CDC27	P30260	824 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	LONRF3	Q496Y0	759 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMCO3	Q6UWJ1	677 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	NFXL1	Q6ZNB6	911 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	METTL16	Q86W50	562 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	VSTM4	Q8IW00	320 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	SENP2	Q9HC62	589 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CPD	O75976	1380 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	C1orf167	Q5SNV9	1468 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CCDC66	A2RUB6	948 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CDKL5	O76039	1030 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	TRIM29	Q14134	588 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	PTPA	Q15257	358 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CCDC102B	Q68D86	513 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	CPLX2	Q6PUV4	134 aa	Known RBP	11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	TBC1D10C	Q8IV04	446 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	FAM89A	Q96GI7	184 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	MYL10	Q9BUA6	226 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	NBPF3	Q9H094	633 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	PCDHA5	Q9Y5H7	936 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620	ALS2	Q96Q42	1657 aa		11.26	□□□□□ -0.61
ZNF3-215	ENST00000487620		B4E1Z4	1266 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	UBE2Q2L	H0YL09	131 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	FOXN1	O15353	648 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZSCAN12	O43309	604 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	SLC9C2	Q5TAH2	1124 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	RESP18	Q5W5W9	173 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	APOA5	Q6Q788	366 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	REXO1L1P	Q8IX06	675 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	MAP3K14	Q99558	947 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	KCNH3	Q9ULD8	1083 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	ECM29	Q5VYK3	1845 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	SEC31A	O94979	1220 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	IARS	P41252	1262 aa	Known RBP	11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	MCAM	P43121	646 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	PDE4B	Q07343	736 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	EPC1	Q9H2F5	836 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	PPP2R2C	Q9Y2T4	447 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620	PKD1L3	Q7Z443	1732 aa		11.25	□□□□□ -0.61
ZNF3-215	ENST00000487620		A0A0U1RQG5	324 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	SH2B2	O14492	632 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	ZBTB43	O43298	467 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	IDH1	O75874	414 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	CDK11B	P21127	795 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	IFIT5	Q13325	482 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	KRBA2	Q6ZNG9	492 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	PARP3	Q9Y6F1	533 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	WDR19	Q8NEZ3	1342 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	COL18A1	P39060	1754 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	TMEM94	Q12767	1356 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	VWA3A	A6NCI4	1184 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	ARHGAP6	O43182	974 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	TADA3	O75528	432 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	PLA2G4A	P47712	749 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	METTL24	Q5JXM2	366 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	STK11IP	Q8N1F8	1099 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	BAG1	Q99933	345 aa	Predicted RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	SRRT	Q9BXP5	876 aa	Known RBP	11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	INTS13	Q9NVM9	706 aa		11.24	□□□□□ -0.61
ZNF3-215	ENST00000487620	GOLGA8A	A7E2F4	631 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	EFCAB8	A8MWE9	144 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	POLR3G	O15318	223 aa	Predicted RBP	11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	RANBP6	O60518	1105 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	CUTA	O60888	179 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	BMP6	P22004	513 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	CASQ1	P31415	396 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	ADK	P55263	362 aa	Known RBP	11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	GNG11	P61952	73 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	SLC26A6	Q9BXS9	759 aa		11.23	□□□□□ -0.61
ZNF3-215	ENST00000487620	C19orf44	Q9H6X5	657 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms