RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 HAND2P61296 217 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 PKP1Q13835 747 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 SBK1Q52WX2 424 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 ADGRA1Q86SQ6 560 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 TMTC2Q8N394 836 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 MPNDQ8N594 471 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 EYA3Q99504 573 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
PRKCB-207ENST00000486868 TAF1P21675 1872 aa13.71□□□□□ -0.21
PRKCB-207ENST00000486868 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 H0YIN7 160 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 TRAK2O60296 914 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 BAG3O95817 575 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
PRKCB-207ENST00000486868 ANTXR2P58335 489 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 CHAF1AQ13111 956 aaPredicted RBP13.7□□□□□ -0.22
PRKCB-207ENST00000486868 MFSD6Q6ZSS7 791 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
PRKCB-207ENST00000486868 NECAB1Q8N987 351 aa13.7□□□□□ -0.22
PRKCB-207ENST00000486868 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
PRKCB-207ENST00000486868 ANGEL1Q9UNK9 670 aaKnown RBP13.7□□□□□ -0.22
PRKCB-207ENST00000486868 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-207ENST00000486868 PRKAB2O43741 272 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 PLCG2P16885 1265 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 PRDX5P30044 214 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 PPARAQ07869 468 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 SCRN1Q12765 414 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 MIGA1Q8NAN2 632 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
PRKCB-207ENST00000486868 MTMR6Q9Y217 621 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
PRKCB-207ENST00000486868 LTBP1Q14766 1721 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 F13A1P00488 732 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 FKBP1AP62942 108 aaKnown RBP13.68□□□□□ -0.22
PRKCB-207ENST00000486868 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
PRKCB-207ENST00000486868 LARP1BQ659C4 914 aaKnown RBP13.68□□□□□ -0.22
PRKCB-207ENST00000486868 C2CD5Q86YS7 1000 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 IGDCC4Q8TDY8 1250 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 ZC3H12CQ9C0D7 883 aaKnown RBP13.68□□□□□ -0.22
PRKCB-207ENST00000486868 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
PRKCB-207ENST00000486868 NID2Q14112 1375 aa13.68□□□□□ -0.22
PRKCB-207ENST00000486868 ANKRD31Q8N7Z5 1873 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 ORC4O43929 436 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
PRKCB-207ENST00000486868 PPP2R5BQ15173 497 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 DPP8Q6V1X1 898 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-207ENST00000486868 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 NSUN7Q8NE18 718 aaKnown RBP13.67□□□□□ -0.22
PRKCB-207ENST00000486868 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
PRKCB-207ENST00000486868 MRIQ9BWK5 157 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 LRRC2Q9BYS8 371 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
PRKCB-207ENST00000486868 LMBRD1Q9NUN5 540 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 MAST2Q6P0Q8 1798 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
PRKCB-207ENST00000486868 MROH7-TTC4A0A0A0MT08 1334 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 GAKO14976 1311 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 GPR75-ASB3A0A0A6YYF3 556 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 B4E1Z4 1266 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 DYNLL1P63167 89 aaKnown RBP13.66□□□□□ -0.22
PRKCB-207ENST00000486868 GSE1Q14687 1217 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 CYB5R4Q7L1T6 521 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 ESR2Q92731 530 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 ZSWIM5Q9P217 1185 aa13.66□□□□□ -0.22
PRKCB-207ENST00000486868 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
PRKCB-207ENST00000486868 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
PRKCB-207ENST00000486868 NEDD4P46934 1319 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
PRKCB-207ENST00000486868 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 CDKL5O76039 1030 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 STK3Q13188 491 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 MCTP1Q6DN14 999 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 CTR9Q6PD62 1173 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 CPLX2Q6PUV4 134 aaKnown RBP13.65□□□□□ -0.22
PRKCB-207ENST00000486868 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 SUPT20HQ8NEM7 779 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 C7orf43Q8WVR3 580 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
PRKCB-207ENST00000486868 LY9Q9HBG7 655 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCB-207ENST00000486868 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
PRKCB-207ENST00000486868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCB-207ENST00000486868 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 KIAA1551Q9HCM1 1747 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 ERICH2A1L162 156 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 MBD3O95983 291 aa13.64□□□□□ -0.23
PRKCB-207ENST00000486868 CTDSPL2Q05D32 466 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms