RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 DICER1Q9UPY3 1922 aaKnown RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 NTSR2O95665 410 aa9.72□□□□□ -0.85
CLRN1-206ENST00000485607 EIF2S2P20042 333 aaKnown RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
CLRN1-206ENST00000485607 PNNQ9H307 717 aaKnown RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 ZNF395Q9H8N7 513 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 IBTKQ9P2D0 1353 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-206ENST00000485607 RIC1Q4ADV7 1423 aa9.72□□□□□ -0.85
CLRN1-206ENST00000485607 NUP98P52948 1817 aa9.71□□□□□ -0.85
CLRN1-206ENST00000485607 RAB15P59190 212 aa9.71□□□□□ -0.86
CLRN1-206ENST00000485607 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
CLRN1-206ENST00000485607 NYXQ9GZU5 481 aa9.71□□□□□ -0.86
CLRN1-206ENST00000485607 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
CLRN1-206ENST00000485607 TCERG1O14776 1098 aaKnown RBP9.7□□□□□ -0.86
CLRN1-206ENST00000485607 ALDH1B1P30837 517 aa9.7□□□□□ -0.86
CLRN1-206ENST00000485607 HOXA10P31260 410 aaPredicted RBP9.7□□□□□ -0.86
CLRN1-206ENST00000485607 IARSP41252 1262 aaKnown RBP9.7□□□□□ -0.86
CLRN1-206ENST00000485607 RTKN2Q8IZC4 609 aa9.7□□□□□ -0.86
CLRN1-206ENST00000485607 SYNE4Q8N205 404 aa9.7□□□□□ -0.86
CLRN1-206ENST00000485607 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
CLRN1-206ENST00000485607 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
CLRN1-206ENST00000485607 TAF1DQ9H5J8 278 aaPredicted RBP9.7□□□□□ -0.86
CLRN1-206ENST00000485607 CHL1O00533 1208 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 LMOD3Q0VAK6 560 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 COPS6Q7L5N1 327 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 XAGE3Q8WTP9 111 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 LRRN4Q8WUT4 740 aa9.69□□□□□ -0.86
CLRN1-206ENST00000485607 FZD9O00144 591 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 MAP3K10Q02779 954 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 PTK2Q05397 1052 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 AIMP1Q12904 312 aaKnown RBP9.68□□□□□ -0.86
CLRN1-206ENST00000485607 INTS6LQ5JSJ4 861 aaKnown RBP9.68□□□□□ -0.86
CLRN1-206ENST00000485607 COL13A1Q5TAT6 717 aaPredicted RBP9.68□□□□□ -0.86
CLRN1-206ENST00000485607 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 SCARF2Q96GP6 870 aaPredicted RBP9.68□□□□□ -0.86
CLRN1-206ENST00000485607 PSMD1Q99460 953 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 BABAM1Q9NWV8 329 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 CHPF2Q9P2E5 772 aa9.68□□□□□ -0.86
CLRN1-206ENST00000485607 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
CLRN1-206ENST00000485607 ABCC4O15439 1325 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 PASKQ96RG2 1323 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 IQCA1LA6NCM1 817 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
CLRN1-206ENST00000485607 WDR43Q15061 677 aaKnown RBP eCLIP9.67□□□□□ -0.86
CLRN1-206ENST00000485607 NR6A1Q15406 480 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 PARP10Q53GL7 1025 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 EAPPQ56P03 285 aaPredicted RBP9.67□□□□□ -0.86
CLRN1-206ENST00000485607 NLRP10Q86W26 655 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 LDHDQ86WU2 507 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 CRAMP1Q96RY5 1269 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 UTP14AQ9BVJ6 771 aaKnown RBP9.67□□□□□ -0.86
CLRN1-206ENST00000485607 DNMT3AQ9Y6K1 912 aaPredicted RBP9.67□□□□□ -0.86
CLRN1-206ENST00000485607 ADAMTSL1Q8N6G6 1762 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 LTBP1Q14766 1721 aa9.67□□□□□ -0.86
CLRN1-206ENST00000485607 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 EPHX2P34913 555 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 SLC10A5Q5PT55 438 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 PPP1R42Q7Z4L9 355 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 GPC2Q8N158 579 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 RBM17Q96I25 401 aaKnown RBP9.66□□□□□ -0.86
CLRN1-206ENST00000485607 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 PRKRIP1Q9H875 184 aaPredicted RBP9.66□□□□□ -0.86
CLRN1-206ENST00000485607 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
CLRN1-206ENST00000485607 TMPRSS4Q9NRS4 437 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 MKRN1Q9UHC7 482 aaKnown RBP9.66□□□□□ -0.86
CLRN1-206ENST00000485607 HACL1Q9UJ83 578 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 GJA3Q9Y6H8 435 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 SCN4AP35499 1836 aa9.66□□□□□ -0.86
CLRN1-206ENST00000485607 ANKRD36CQ5JPF3 1778 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 COL4A1P02462 1669 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 HSPA1AP0DMV8 641 aaKnown RBP9.65□□□□□ -0.86
CLRN1-206ENST00000485607 HSPA1BP0DMV9 641 aaKnown RBP9.65□□□□□ -0.86
CLRN1-206ENST00000485607 SCNN1DP51172 638 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 TCIRG1Q13488 830 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 HDGFL1Q5TGJ6 251 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 MAP1SQ66K74 1059 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-206ENST00000485607 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 LARGE2Q8N3Y3 721 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 JDP2Q8WYK2 163 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 ATP6V0A2Q9Y487 856 aa9.65□□□□□ -0.86
CLRN1-206ENST00000485607 IGHA1P01876 353 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 AOC3Q16853 763 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 ADAM32Q8TC27 787 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
CLRN1-206ENST00000485607 LAMB2P55268 1798 aa9.64□□□□□ -0.87
CLRN1-206ENST00000485607 CNTNAP1P78357 1384 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 DUOX1Q9NRD9 1551 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 SH3TC1Q8TE82 1336 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 ATP5J2-PTCD1G3V325 749 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 APAF1O14727 1248 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 PPIP5K2O43314 1243 aa9.63□□□□□ -0.87
CLRN1-206ENST00000485607 ZNF853P0CG23 659 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms