RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PRR19A6NJB7 356 aa7.72□□□□□ -1.17
SMC4-215ENST00000484799 RNGTTO60942 597 aaKnown RBP7.72□□□□□ -1.17
SMC4-215ENST00000484799 IRAK1P51617 712 aa7.72□□□□□ -1.17
SMC4-215ENST00000484799 CPSF6Q16630 551 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMC4-215ENST00000484799 ALG1LQ6GMV1 187 aa7.72□□□□□ -1.17
SMC4-215ENST00000484799 TRIM56Q9BRZ2 755 aaKnown RBP7.72□□□□□ -1.17
SMC4-215ENST00000484799 TREHO43280 583 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 MED26O95402 600 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 ECEL1O95672 775 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 F13BP05160 661 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 GSTP1P09211 210 aaKnown RBP7.71□□□□□ -1.18
SMC4-215ENST00000484799 ENOX2Q16206 610 aaKnown RBP7.71□□□□□ -1.18
SMC4-215ENST00000484799 PI16Q6UXB8 463 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 EZH1Q92800 747 aaPredicted RBP7.71□□□□□ -1.18
SMC4-215ENST00000484799 ACSBG1Q96GR2 724 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 NRSN2Q9GZP1 204 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 ATXN3LQ9H3M9 355 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 LRRC4CQ9HCJ2 640 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 PICK1Q9NRD5 415 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 PRKAG2Q9UGJ0 569 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 SPG7Q9UQ90 795 aa7.71□□□□□ -1.18
SMC4-215ENST00000484799 GIPC1O14908 333 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 IGHA2P01877 340 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 CTSBP07858 339 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 GSTT1P30711 240 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 GP2P55259 537 aaKnown RBP7.7□□□□□ -1.18
SMC4-215ENST00000484799 ID3Q02535 119 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 ZAR1Q86SH2 424 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 CEP44Q9C0F1 390 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 FAM105AQ9NUU6 356 aa7.7□□□□□ -1.18
SMC4-215ENST00000484799 FOSL1P15407 271 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 ARNTP27540 789 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 FAAP100Q0VG06 881 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 DSC3Q14574 896 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 CYP27C1Q4G0S4 372 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 SULF2Q8IWU5 870 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 FBF1Q8TES7 1133 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 WDR18Q9BV38 432 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 SRCIN1Q9C0H9 1055 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 CCDC86Q9H6F5 360 aaKnown RBP7.69□□□□□ -1.18
SMC4-215ENST00000484799 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
SMC4-215ENST00000484799 KIAA1324LA8MWY0 1029 aaPredicted RBP7.68□□□□□ -1.18
SMC4-215ENST00000484799 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
SMC4-215ENST00000484799 ARHGAP27Q6ZUM4 889 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 GLIS3Q8NEA6 775 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 ASB16Q96NS5 453 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 SEMA6CQ9H3T2 930 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 KRT82Q9NSB4 513 aa7.68□□□□□ -1.18
SMC4-215ENST00000484799 FAM170BA6NMN3 283 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 PDIA4P13667 645 aaKnown RBP7.67□□□□□ -1.18
SMC4-215ENST00000484799 NME2P22392 152 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 FGD1P98174 961 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 AEBP1Q8IUX7 1158 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 TRAIPQ9BWF2 469 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 ACSS3Q9H6R3 686 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
SMC4-215ENST00000484799 LMNB1P20700 586 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 HOXA10P31260 410 aaPredicted RBP7.66□□□□□ -1.18
SMC4-215ENST00000484799 ADMP35318 185 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 LRRC14Q15048 493 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 TPTE2Q6XPS3 522 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 TP53INP2Q8IXH6 220 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 SMYD4Q8IYR2 804 aaPredicted RBP7.66□□□□□ -1.18
SMC4-215ENST00000484799 PSMG3-AS1Q96PY0 264 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 PCOLCE2Q9UKZ9 415 aa7.66□□□□□ -1.18
SMC4-215ENST00000484799 PAX4O43316 350 aa7.65□□□□□ -1.18
SMC4-215ENST00000484799 OGFOD3Q6PK18 319 aa7.65□□□□□ -1.18
SMC4-215ENST00000484799 WDR89Q96FK6 387 aaPredicted RBP7.65□□□□□ -1.18
SMC4-215ENST00000484799 BSDC1Q9NW68 430 aaPredicted RBP7.65□□□□□ -1.18
SMC4-215ENST00000484799 CRIM1Q9NZV1 1036 aa7.65□□□□□ -1.18
SMC4-215ENST00000484799 TMPRSS2O15393 492 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 SPINK2P20155 84 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 KIF4BQ2VIQ3 1234 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 FBXL18Q96ME1 805 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 FRMD6Q96NE9 622 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
SMC4-215ENST00000484799 ZNF862O60290 1169 aa7.63□□□□□ -1.19
SMC4-215ENST00000484799 LDHBP07195 334 aaKnown RBP7.63□□□□□ -1.19
SMC4-215ENST00000484799 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
SMC4-215ENST00000484799 TTLL4Q14679 1199 aa7.63□□□□□ -1.19
SMC4-215ENST00000484799 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
SMC4-215ENST00000484799 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.63□□□□□ -1.19
SMC4-215ENST00000484799 PPM1HQ9ULR3 514 aa7.63□□□□□ -1.19
SMC4-215ENST00000484799 OAS3Q9Y6K5 1087 aaKnown RBP7.63□□□□□ -1.19
SMC4-215ENST00000484799 FMR1Q06787 632 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMC4-215ENST00000484799 DIEXFQ68CQ4 756 aaKnown RBP7.62□□□□□ -1.19
SMC4-215ENST00000484799 SHISA5Q8N114 240 aa7.62□□□□□ -1.19
SMC4-215ENST00000484799 NECAB3Q96P71 396 aaPredicted RBP7.62□□□□□ -1.19
SMC4-215ENST00000484799 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
SMC4-215ENST00000484799 DISC1Q9NRI5 854 aa7.62□□□□□ -1.19
SMC4-215ENST00000484799 FAM8A1Q9UBU6 413 aa7.62□□□□□ -1.19
SMC4-215ENST00000484799 WWC3Q9ULE0 1092 aa7.62□□□□□ -1.19
SMC4-215ENST00000484799 FAM87AP0C7U9 286 aa7.61□□□□□ -1.19
SMC4-215ENST00000484799 MCTP1Q6DN14 999 aa7.61□□□□□ -1.19
SMC4-215ENST00000484799 VSIG10LQ86VR7 867 aa7.61□□□□□ -1.19
SMC4-215ENST00000484799 C1GALT1Q9NS00 363 aa7.61□□□□□ -1.19
SMC4-215ENST00000484799 FBXO24O75426 580 aa7.6□□□□□ -1.19
SMC4-215ENST00000484799 TAL1P17542 331 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms