RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MROH2BQ7Z745 1585 aa7.03□□□□□ -1.28
SSBP1-211ENST00000484178 TOP2AP11388 1531 aaKnown RBP7.03□□□□□ -1.28
SSBP1-211ENST00000484178 POLR3DP05423 398 aaPredicted RBP7.03□□□□□ -1.28
SSBP1-211ENST00000484178 SPRED3Q2MJR0 410 aa7.03□□□□□ -1.28
SSBP1-211ENST00000484178 OGFOD2Q6N063 350 aa7.03□□□□□ -1.28
SSBP1-211ENST00000484178 C1GALT1Q9NS00 363 aa7.03□□□□□ -1.28
SSBP1-211ENST00000484178 FAM105AQ9NUU6 356 aa7.03□□□□□ -1.28
SSBP1-211ENST00000484178 OGFOD3Q6PK18 319 aa7.02□□□□□ -1.29
SSBP1-211ENST00000484178 ZNF765Q7L2R6 523 aa7.02□□□□□ -1.29
SSBP1-211ENST00000484178 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
SSBP1-211ENST00000484178 ZNF576Q9H609 170 aa7.02□□□□□ -1.29
SSBP1-211ENST00000484178 TNIKQ9UKE5 1360 aa7.02□□□□□ -1.29
SSBP1-211ENST00000484178 EIF4G1Q04637 1599 aaKnown RBP7.01□□□□□ -1.29
SSBP1-211ENST00000484178 ICMTO60725 284 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 ECM1Q16610 540 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 RETREG2Q8NC44 543 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 FLCNQ8NFG4 579 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
SSBP1-211ENST00000484178 AOC2O75106 756 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 RAB6AP20340 208 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 ASPAP45381 313 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 AP3B2Q13367 1082 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
SSBP1-211ENST00000484178 AKAP4Q5JQC9 854 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 LCE1DQ5T752 114 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 AEBP1Q8IUX7 1158 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 STK11IPQ8N1F8 1099 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 CITED4Q96RK1 184 aa7□□□□□ -1.29
SSBP1-211ENST00000484178 ABL1P00519 1130 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 JAG1P78504 1218 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 PRPF40BQ6NWY9 871 aaKnown RBP6.99□□□□□ -1.29
SSBP1-211ENST00000484178 WFDC3Q8IUB2 231 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 BCL7CQ8WUZ0 217 aaPredicted RBP6.99□□□□□ -1.29
SSBP1-211ENST00000484178 MISP3Q96FF7 219 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 FAM129BQ96TA1 746 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 WDR18Q9BV38 432 aa6.99□□□□□ -1.29
SSBP1-211ENST00000484178 CECR2Q9BXF3 1484 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 ECEL1O95672 775 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 PDE3BQ13370 1112 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
SSBP1-211ENST00000484178 CYP27C1Q4G0S4 372 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 ANO2Q9NQ90 1003 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 BRPF3Q9ULD4 1205 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 AP4E1Q9UPM8 1137 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 CLSPNQ9HAW4 1339 aa6.98□□□□□ -1.29
SSBP1-211ENST00000484178 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-211ENST00000484178 CPNE3O75131 537 aaKnown RBP6.97□□□□□ -1.29
SSBP1-211ENST00000484178 TMCO4Q5TGY1 634 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 USPL1Q5W0Q7 1092 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 CCER1Q8TC90 406 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-211ENST00000484178 DNAJC25Q9H1X3 360 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 USTQ9Y2C2 406 aa6.97□□□□□ -1.29
SSBP1-211ENST00000484178 PAPLNO95428 1278 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 C8AP07357 584 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 ARHGAP4P98171 946 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 EHD4Q9H223 541 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 ABCB6Q9NP58 842 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 PPP1R9AQ9ULJ8 1098 aa6.96□□□□□ -1.3
SSBP1-211ENST00000484178 TMPRSS2O15393 492 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 NDUFB5O43674 189 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 IGHA2P01877 340 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 KRT82Q9NSB4 513 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 DAGLAQ9Y4D2 1042 aa6.95□□□□□ -1.3
SSBP1-211ENST00000484178 WIZO95785 1651 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 GOLGA3Q08378 1498 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 BIN1O00499 593 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 MFAP1P55081 439 aaKnown RBP6.94□□□□□ -1.3
SSBP1-211ENST00000484178 HNRNPUQ00839 825 aaKnown RBP eCLIP6.94□□□□□ -1.3
SSBP1-211ENST00000484178 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
SSBP1-211ENST00000484178 ATXN3LQ9H3M9 355 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 PCDHGC5Q9Y5F6 944 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 SMARCA4P51532 1647 aa6.94□□□□□ -1.3
SSBP1-211ENST00000484178 CEP162Q5TB80 1403 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 SLFN14P0C7P3 912 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 ORC1Q13415 861 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 KIF4BQ2VIQ3 1234 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 SPRED2Q7Z698 418 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 GLYCTKQ8IVS8 523 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 FAM9AQ8IZU1 332 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-211ENST00000484178 NETO1Q8TDF5 533 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 PEG3Q9GZU2 1588 aa6.93□□□□□ -1.3
SSBP1-211ENST00000484178 BAZ1BQ9UIG0 1483 aaKnown RBP6.92□□□□□ -1.3
SSBP1-211ENST00000484178 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 H3BRB1 525 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 ID3Q02535 119 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 ZNF792Q3KQV3 632 aa6.92□□□□□ -1.3
SSBP1-211ENST00000484178 ATG4DQ86TL0 474 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms