RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 TIAM2Q8IVF5 1701 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 USP17L3A6NCW0 530 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 USP17L4A6NCW7 530 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 E7EWF7 191 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 PRKAB2O43741 272 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 RPS6KB1P23443 525 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 DYNLL1P63167 89 aaKnown RBP19.27■□□□□ 0.68
RFTN1-209ENST00000483671 USP17L1Q7RTZ2 530 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 PPP1R1BQ9UD71 204 aaPredicted RBP19.27■□□□□ 0.68
RFTN1-209ENST00000483671 PSME4Q14997 1843 aa19.27■□□□□ 0.68
RFTN1-209ENST00000483671 PLCG2P16885 1265 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 HDLBPQ00341 1268 aaKnown RBP19.26■□□□□ 0.67
RFTN1-209ENST00000483671 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 PDRG1Q9NUG6 133 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 AATFQ9NY61 560 aaKnown RBP eCLIP19.26■□□□□ 0.67
RFTN1-209ENST00000483671 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 MYH2Q9UKX2 1941 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 ARFGEF1Q9Y6D6 1849 aa19.26■□□□□ 0.67
RFTN1-209ENST00000483671 HHIPL2Q6UWX4 724 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 FBXL16Q8N461 479 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
RFTN1-209ENST00000483671 WDR19Q8NEZ3 1342 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 YDJCA8MPS7 323 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 IARSP41252 1262 aaKnown RBP19.25■□□□□ 0.67
RFTN1-209ENST00000483671 TDO2P48775 406 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 ANKRD1Q15327 319 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 DHX32Q7L7V1 743 aaKnown RBP19.25■□□□□ 0.67
RFTN1-209ENST00000483671 LARGE2Q8N3Y3 721 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 NLGN2Q8NFZ4 835 aa19.25■□□□□ 0.67
RFTN1-209ENST00000483671 ZNF277Q9NRM2 450 aaPredicted RBP19.25■□□□□ 0.67
RFTN1-209ENST00000483671 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
RFTN1-209ENST00000483671 COL4A5P29400 1685 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 MYO3BQ8WXR4 1341 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 NFKBIEO00221 500 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 CPA1P15085 419 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 BTDP43251 543 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 AK2P54819 239 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 HAND2P61296 217 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 EXOSC10Q01780 885 aaKnown RBP19.24■□□□□ 0.67
RFTN1-209ENST00000483671 SBK1Q52WX2 424 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 KLHL34Q8N239 644 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 SDR42E1Q8WUS8 393 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 FBXW7Q969H0 707 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 DCP1AQ9NPI6 582 aaPredicted RBP19.24■□□□□ 0.67
RFTN1-209ENST00000483671 KCNQ5Q9NR82 932 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 TTF2Q9UNY4 1162 aaKnown RBP19.24■□□□□ 0.67
RFTN1-209ENST00000483671 DAGLAQ9Y4D2 1042 aa19.24■□□□□ 0.67
RFTN1-209ENST00000483671 PCP11498 1178 aaKnown RBP19.23■□□□□ 0.67
RFTN1-209ENST00000483671 CUL4AQ13619 759 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 TBC1D10CQ8IV04 446 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 STAG1Q8WVM7 1258 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 TMX3Q96JJ7 454 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 AGXT2Q9BYV1 514 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 ZNRF3Q9ULT6 936 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 LIMCH1Q9UPQ0 1083 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
RFTN1-209ENST00000483671 VIL1P09327 827 aaKnown RBP19.22■□□□□ 0.67
RFTN1-209ENST00000483671 RHBDL3P58872 404 aa19.22■□□□□ 0.67
RFTN1-209ENST00000483671 COL9A3Q14050 684 aaPredicted RBP19.22■□□□□ 0.67
RFTN1-209ENST00000483671 NIM1KQ8IY84 436 aa19.22■□□□□ 0.67
RFTN1-209ENST00000483671 MB21D2Q8IYB1 491 aaPredicted RBP19.22■□□□□ 0.67
RFTN1-209ENST00000483671 SH3RF3Q8TEJ3 882 aaPredicted RBP19.22■□□□□ 0.67
RFTN1-209ENST00000483671 TEKT1Q969V4 418 aa19.22■□□□□ 0.67
RFTN1-209ENST00000483671 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
RFTN1-209ENST00000483671 ARPP21Q9UBL0 812 aaPredicted RBP19.22■□□□□ 0.67
RFTN1-209ENST00000483671 FGRP09769 529 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 NT5C2P49902 561 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 PPARAQ07869 468 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 AKNAD1Q5T1N1 836 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
RFTN1-209ENST00000483671 ZDHHC15Q96MV8 337 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 RNF41Q9H4P4 317 aaPredicted RBP19.21■□□□□ 0.67
RFTN1-209ENST00000483671 CNNM2Q9H8M5 875 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 SERPINA10Q9UK55 444 aa19.21■□□□□ 0.67
RFTN1-209ENST00000483671 DDIT3P35638 169 aa19.2■□□□□ 0.66
RFTN1-209ENST00000483671 TRDNQ13061 729 aa19.2■□□□□ 0.66
RFTN1-209ENST00000483671 TOB2Q14106 344 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 RSBN1LQ6PCB5 846 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 RALYLQ86SE5 291 aaKnown RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 INTS4Q96HW7 963 aaKnown RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 GMLQ99445 158 aa19.2■□□□□ 0.66
RFTN1-209ENST00000483671 FHDC1Q9C0D6 1143 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 SH2B1Q9NRF2 756 aaPredicted RBP19.2■□□□□ 0.66
RFTN1-209ENST00000483671 MCM5P33992 734 aa19.19■□□□□ 0.66
RFTN1-209ENST00000483671 MTA3Q9BTC8 594 aa19.19■□□□□ 0.66
RFTN1-209ENST00000483671 KRT23Q9C075 422 aa19.19■□□□□ 0.66
RFTN1-209ENST00000483671 ROBO3Q96MS0 1386 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 DDX60LQ5H9U9 1706 aaKnown RBP19.18■□□□□ 0.66
RFTN1-209ENST00000483671 LAMB1P07942 1786 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 USP17L12C9JPN9 530 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 USP17L21D6R901 530 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 USP5P45974 858 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 CRKP46108 304 aa19.18■□□□□ 0.66
RFTN1-209ENST00000483671 MMP14P50281 582 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms