RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
SND1-210ENST00000483503 IQSEC3Q9UPP2 1182 aaPredicted RBP13.98□□□□□ -0.17
SND1-210ENST00000483503 TAF1P21675 1872 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 PLSCR1O15162 318 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 BBOX1O75936 387 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 CTDNEP1O95476 244 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 NT5C2P49902 561 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 RESTQ13127 1097 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 TXNRD1Q16881 649 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 ZNF804AQ7Z570 1209 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
SND1-210ENST00000483503 BRIP1Q9BX63 1249 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
SND1-210ENST00000483503 TCHHQ07283 1943 aa13.97□□□□□ -0.17
SND1-210ENST00000483503 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 TNRC6CQ9HCJ0 1690 aaKnown RBP13.96□□□□□ -0.17
SND1-210ENST00000483503 ERICH2A1L162 156 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 GOLGA6L4A6NEF3 574 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 B4E1Z4 1266 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 GADD45BO75293 160 aaPredicted RBP13.96□□□□□ -0.17
SND1-210ENST00000483503 RCAN1P53805 252 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 GSTO1P78417 241 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 TMEM67Q5HYA8 995 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 FERMT3Q86UX7 667 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 SGMS1Q86VZ5 419 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 MIGA1Q8NAN2 632 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 UPF1Q92900 1129 aaKnown RBP eCLIP13.96□□□□□ -0.17
SND1-210ENST00000483503 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 CRNKL1Q9BZJ0 848 aaKnown RBP13.96□□□□□ -0.17
SND1-210ENST00000483503 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
SND1-210ENST00000483503 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 CCDC69A6NI79 296 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.188e-11■■■□□ 15.2
SND1-210ENST00000483503 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 CERS3Q8IU89 383 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 NSUN4Q96CB9 384 aaKnown RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
SND1-210ENST00000483503 HPS5Q9UPZ3 1129 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 MAST2Q6P0Q8 1798 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 CHD4Q14839 1912 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 DUOX1Q9NRD9 1551 aa13.95□□□□□ -0.18
SND1-210ENST00000483503 NEDD4P46934 1319 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 IRS2Q9Y4H2 1338 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 ZBTB43O43298 467 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 PRKAB2O43741 272 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
SND1-210ENST00000483503 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
SND1-210ENST00000483503 CTDSPL2Q05D32 466 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 PPARAQ07869 468 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 CHAF1AQ13111 956 aaPredicted RBP13.94□□□□□ -0.18
SND1-210ENST00000483503 CACNA1SQ13698 1873 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 APOA5Q6Q788 366 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 NLGN1Q8N2Q7 840 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 ESR2Q92731 530 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 C8orf76Q96K31 380 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 ATP8A2Q9NTI2 1148 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 TFCP2L1Q9NZI6 479 aa13.94□□□□□ -0.18
SND1-210ENST00000483503 ORC3Q9UBD5 711 aaPredicted RBP13.94□□□□□ -0.18
SND1-210ENST00000483503 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
SND1-210ENST00000483503 CCDC196A0A1B0GTZ2 297 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 SYCE3A1L190 88 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 KDM4AO75164 1064 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 LDHCP07864 332 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 MECOMQ03112 1051 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 WTAPQ15007 396 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 TDRD7Q8NHU6 1098 aaKnown RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 WASF1Q92558 559 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 NOL10Q9BSC4 688 aaKnown RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 LY9Q9HBG7 655 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
SND1-210ENST00000483503 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 ZSWIM5Q9P217 1185 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 GGA1Q9UJY5 639 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 SLC12A7Q9Y666 1083 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 NID2Q14112 1375 aa13.93□□□□□ -0.18
SND1-210ENST00000483503 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 LDHBP07195 334 aaKnown RBP13.92□□□□□ -0.18
SND1-210ENST00000483503 KLRK1P26718 216 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 BRAPQ7Z569 592 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 TTC6Q86TZ1 520 aa13.92□□□□□ -0.18
SND1-210ENST00000483503 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
SND1-210ENST00000483503 UBAC1Q9BSL1 405 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms