RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 BBOX1O75936 387 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
CPNE1-225ENST00000483495 UBE2HP62256 183 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 GIMAP6Q6P9H5 292 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 IGDCC4Q8TDY8 1250 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 CRAMP1Q96RY5 1269 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 MTA3Q9BTC8 594 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 KRT23Q9C075 422 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 TACC3Q9Y6A5 838 aa15.56■□□□□ 0.08
CPNE1-225ENST00000483495 GOLGA8BA8MQT2 603 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 APBA3O96018 575 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 MECOMQ03112 1051 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 CTDSPL2Q05D32 466 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 RESTQ13127 1097 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 SGMS1Q86VZ5 419 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 TDRD7Q8NHU6 1098 aaKnown RBP15.55■□□□□ 0.08
CPNE1-225ENST00000483495 BRIP1Q9BX63 1249 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 ZSCAN16Q9H4T2 348 aaPredicted RBP15.55■□□□□ 0.08
CPNE1-225ENST00000483495 GRPEL1Q9HAV7 217 aa15.55■□□□□ 0.08
CPNE1-225ENST00000483495 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
CPNE1-225ENST00000483495 FIBPO43427 364 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 LIFRP42702 1097 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 KRT85P78386 507 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 MFSD6Q6ZSS7 791 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 RNF41Q9H4P4 317 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-225ENST00000483495 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-225ENST00000483495 ELP1O95163 1332 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 TCHHQ07283 1943 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 H3BQV1 296 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
CPNE1-225ENST00000483495 ATP2B4P23634 1241 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 RXRBP28702 533 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 GPSM2P81274 684 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 PPARAQ07869 468 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 IFFO2Q5TF58 517 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 SPTY2D1Q68D10 685 aaPredicted RBP15.54■□□□□ 0.08
CPNE1-225ENST00000483495 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 LY9Q9HBG7 655 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 PODXL2Q9NZ53 605 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 ZSWIM5Q9P217 1185 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 MAST2Q6P0Q8 1798 aa15.54■□□□□ 0.08
CPNE1-225ENST00000483495 MYH13Q9UKX3 1938 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 PRDX5P30044 214 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 ZNF804AQ7Z570 1209 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-225ENST00000483495 WDR66Q8TBY9 1149 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 SDR42E1Q8WUS8 393 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 SYAP1Q96A49 352 aaPredicted RBP15.53■□□□□ 0.08
CPNE1-225ENST00000483495 INCENPQ9NQS7 918 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 NRXN2Q9P2S2 1712 aa15.53■□□□□ 0.08
CPNE1-225ENST00000483495 KDM4AO75164 1064 aa15.52■□□□□ 0.08
CPNE1-225ENST00000483495 DYNLL1P63167 89 aaKnown RBP15.52■□□□□ 0.08
CPNE1-225ENST00000483495 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-225ENST00000483495 APOA5Q6Q788 366 aa15.52■□□□□ 0.08
CPNE1-225ENST00000483495 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.08
CPNE1-225ENST00000483495 NID2Q14112 1375 aa15.52■□□□□ 0.07
CPNE1-225ENST00000483495 FGRP09769 529 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 PCP11498 1178 aaKnown RBP15.51■□□□□ 0.07
CPNE1-225ENST00000483495 TMEM67Q5HYA8 995 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 TTC6Q86TZ1 520 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 GGA1Q9UJY5 639 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 CHD4Q14839 1912 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
CPNE1-225ENST00000483495 UFL1O94874 794 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 IL1R1P14778 569 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 METAP2P50579 478 aaKnown RBP eCLIP15.5■□□□□ 0.07
CPNE1-225ENST00000483495 FAM173BQ6P4H8 233 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 LRSAM1Q6UWE0 723 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 SENP2Q9HC62 589 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 RGPD3A6NKT7 1758 aaPredicted RBP15.5■□□□□ 0.07
CPNE1-225ENST00000483495 RGPD4Q7Z3J3 1758 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 LRRC37AA6NMS7 1700 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 CPLX1O14810 134 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 IFIT3O14879 490 aaKnown RBP15.5■□□□□ 0.07
CPNE1-225ENST00000483495 CRNKL1Q9BZJ0 848 aaKnown RBP15.5■□□□□ 0.07
CPNE1-225ENST00000483495 ATP8A2Q9NTI2 1148 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 DUOX1Q9NRD9 1551 aa15.5■□□□□ 0.07
CPNE1-225ENST00000483495 ZBTB43O43298 467 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 CDKL5O76039 1030 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 RCAN1P53805 252 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 LTBP1Q14766 1721 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 SART3Q15020 963 aaKnown RBP15.49■□□□□ 0.07
CPNE1-225ENST00000483495 ATL3Q6DD88 541 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 CTR9Q6PD62 1173 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 TMTC2Q8N394 836 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 TNS1Q9HBL0 1735 aaKnown RBP15.49■□□□□ 0.07
CPNE1-225ENST00000483495 CD209Q9NNX6 404 aa15.49■□□□□ 0.07
CPNE1-225ENST00000483495 ORC3Q9UBD5 711 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-225ENST00000483495 SYCE3A1L190 88 aa15.48■□□□□ 0.07
CPNE1-225ENST00000483495 MINDY4BA8MYZ0 360 aa15.48■□□□□ 0.07
CPNE1-225ENST00000483495 LDHBP07195 334 aaKnown RBP15.48■□□□□ 0.07
CPNE1-225ENST00000483495 ADD1P35611 737 aaKnown RBP15.48■□□□□ 0.07
CPNE1-225ENST00000483495 CCDC183Q5T5S1 534 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms