RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 STYK1Q6J9G0 422 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 CDCA7LQ96GN5 454 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
TVP23B-203ENST00000482741 SCN9AQ15858 1988 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 HMOX1P09601 288 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
TVP23B-203ENST00000482741 NKX2-3Q8TAU0 364 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 ALDH8A1Q9H2A2 487 aaPredicted RBP9.49□□□□□ -0.89
TVP23B-203ENST00000482741 DCTN4Q9UJW0 460 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 TTC41PQ6P2S7 1318 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 MYH1P12882 1939 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 PITPNM1O00562 1244 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 STARD3NLO95772 234 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 ZNF76P36508 570 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 LRRC41Q15345 812 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
TVP23B-203ENST00000482741 NME8Q8N427 588 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 IER2Q9BTL4 223 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 ROBO3Q96MS0 1386 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 MAFGO15525 162 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 FDX1P10109 184 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 NUCB1Q02818 461 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 CHRNA2Q15822 529 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 MAP9Q49MG5 647 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 RNF34Q969K3 372 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 FAM126AQ9BYI3 521 aaPredicted RBP9.48□□□□□ -0.89
TVP23B-203ENST00000482741 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 DDX56Q9NY93 547 aaKnown RBP9.48□□□□□ -0.89
TVP23B-203ENST00000482741 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.48□□□□□ -0.89
TVP23B-203ENST00000482741 RLFQ13129 1914 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 MED23Q9ULK4 1368 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 DDX58O95786 925 aaKnown RBP9.48□□□□□ -0.89
TVP23B-203ENST00000482741 MCM10Q7L590 875 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 MAF1Q9H063 256 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
TVP23B-203ENST00000482741 GCKRQ14397 625 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 SYCP2LQ5T4T6 812 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 LDHBP07195 334 aaKnown RBP9.47□□□□□ -0.89
TVP23B-203ENST00000482741 HNRNPUQ00839 825 aaKnown RBP eCLIP9.47□□□□□ -0.89
TVP23B-203ENST00000482741 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
TVP23B-203ENST00000482741 SORBS3O60504 671 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 CEP85Q6P2H3 762 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 ZSCAN29Q8IWY8 852 aaPredicted RBP9.46□□□□□ -0.89
TVP23B-203ENST00000482741 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 NYXQ9GZU5 481 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 PCDHB9Q9Y5E1 797 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.89
TVP23B-203ENST00000482741 ICMTO60725 284 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 SIRT2Q8IXJ6 389 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.89
TVP23B-203ENST00000482741 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.89
TVP23B-203ENST00000482741 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.89
TVP23B-203ENST00000482741 UBN2Q6ZU65 1347 aa9.46□□□□□ -0.9
TVP23B-203ENST00000482741 COL4A5P29400 1685 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 SFI1A8K8P3 1242 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 TEFQ10587 303 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 VAMP1P23763 118 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 CRKLP46109 303 aaKnown RBP9.45□□□□□ -0.9
TVP23B-203ENST00000482741 AMPD3Q01432 767 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 ARID5AQ03989 594 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 C10orf62Q5T681 223 aaPredicted RBP9.45□□□□□ -0.9
TVP23B-203ENST00000482741 TMEM92Q6UXU6 159 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 NLRP10Q86W26 655 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 TCEAL9Q9UHQ7 104 aa9.45□□□□□ -0.9
TVP23B-203ENST00000482741 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 CD46P15529 392 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 CACNB1Q02641 598 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 LONRF3Q496Y0 759 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 SKAP1Q86WV1 359 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 OATP04181 439 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 PSMD2Q13200 908 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 FERMT3Q86UX7 667 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 LRRC4BQ9NT99 713 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 SETQ01105 290 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 ECM1Q16610 540 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 ZNF746Q6NUN9 644 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 MTA3Q9BTC8 594 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 NOB1Q9ULX3 412 aaKnown RBP9.44□□□□□ -0.9
TVP23B-203ENST00000482741 RAD50Q92878 1312 aa9.44□□□□□ -0.9
TVP23B-203ENST00000482741 RLBP1P12271 317 aa9.43□□□□□ -0.9
TVP23B-203ENST00000482741 NOVP48745 357 aa9.43□□□□□ -0.9
TVP23B-203ENST00000482741 C1QBPQ07021 282 aaKnown RBP9.43□□□□□ -0.9
TVP23B-203ENST00000482741 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
TVP23B-203ENST00000482741 PLIN4Q96Q06 1357 aa9.43□□□□□ -0.9
TVP23B-203ENST00000482741 LOXHD1Q8IVV2 1947 aa9.43□□□□□ -0.9
TVP23B-203ENST00000482741 WDR19Q8NEZ3 1342 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms