RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 WDR18Q9BV38 432 aa6.7□□□□□ -1.34
GTF3A-207ENST00000482655 NISCHQ9Y2I1 1504 aa6.7□□□□□ -1.34
GTF3A-207ENST00000482655 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.69□□□□□ -1.34
GTF3A-207ENST00000482655 GIPC1O14908 333 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 SLFN14P0C7P3 912 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 CD97P48960 835 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 SND1Q7KZF4 910 aaKnown RBP eCLIP6.69□□□□□ -1.34
GTF3A-207ENST00000482655 SULF2Q8IWU5 870 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 OSBPL1AQ9BXW6 950 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
GTF3A-207ENST00000482655 KRT82Q9NSB4 513 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 FAM105AQ9NUU6 356 aa6.69□□□□□ -1.34
GTF3A-207ENST00000482655 LDHBP07195 334 aaKnown RBP6.68□□□□□ -1.34
GTF3A-207ENST00000482655 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
GTF3A-207ENST00000482655 LIG1P18858 919 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 EZH1Q92800 747 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-207ENST00000482655 KCNB2Q92953 911 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 TBC1D32Q96NH3 1257 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 SETDB2Q96T68 719 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
GTF3A-207ENST00000482655 EMILIN2Q9BXX0 1053 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 CEP44Q9C0F1 390 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 WWC3Q9ULE0 1092 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 PPM1HQ9ULR3 514 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 SAMM50Q9Y512 469 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 SYNGAP1Q96PV0 1343 aa6.68□□□□□ -1.34
GTF3A-207ENST00000482655 NFICP08651 508 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 FGD1P98174 961 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 CPSF6Q16630 551 aaKnown RBP eCLIP6.67□□□□□ -1.34
GTF3A-207ENST00000482655 TPTE2Q6XPS3 522 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 C3orf58Q8NDZ4 430 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 ATXN3LQ9H3M9 355 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 SEMA6CQ9H3T2 930 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 CBX8Q9HC52 389 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 PIM2Q9P1W9 311 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 LEMD3Q9Y2U8 911 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 DAGLAQ9Y4D2 1042 aa6.67□□□□□ -1.34
GTF3A-207ENST00000482655 PRR19A6NJB7 356 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 NME2P22392 152 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 ARNTP27540 789 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 ID3Q02535 119 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 ACSBG1Q96GR2 724 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 OSBPL7Q9BZF2 842 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 C12orf49Q9H741 205 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 FAM8A1Q9UBU6 413 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 PPP1R9AQ9ULJ8 1098 aa6.66□□□□□ -1.34
GTF3A-207ENST00000482655 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-207ENST00000482655 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 ZNF862O60290 1169 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 F13BP05160 661 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 KIF4BQ2VIQ3 1234 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 MAP1SQ66K74 1059 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-207ENST00000482655 ZAR1Q86SH2 424 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 WDR89Q96FK6 387 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-207ENST00000482655 FRMD6Q96NE9 622 aa6.65□□□□□ -1.34
GTF3A-207ENST00000482655 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
GTF3A-207ENST00000482655 FBXO24O75426 580 aa6.64□□□□□ -1.35
GTF3A-207ENST00000482655 CYP27A1Q02318 531 aa6.64□□□□□ -1.35
GTF3A-207ENST00000482655 DUSP27Q5VZP5 1158 aa6.64□□□□□ -1.35
GTF3A-207ENST00000482655 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
GTF3A-207ENST00000482655 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
GTF3A-207ENST00000482655 CRIM1Q9NZV1 1036 aa6.64□□□□□ -1.35
GTF3A-207ENST00000482655 ANKRD33BA6NCL7 494 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 PRPF40AO75400 957 aaKnown RBP6.63□□□□□ -1.35
GTF3A-207ENST00000482655 MED26O95402 600 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 USP17L7P0C7H9 530 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 GNA15P30679 374 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 COL19A1Q14993 1142 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 EAPPQ56P03 285 aaPredicted RBP6.63□□□□□ -1.35
GTF3A-207ENST00000482655 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 LGR6Q9HBX8 967 aa6.63□□□□□ -1.35
GTF3A-207ENST00000482655 TTF2Q9UNY4 1162 aaKnown RBP6.63□□□□□ -1.35
GTF3A-207ENST00000482655 ENC1O14682 589 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 CYP26A1O43174 497 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
GTF3A-207ENST00000482655 FOSL1P15407 271 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 SPINK2P20155 84 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 EIF4BP23588 611 aaKnown RBP6.62□□□□□ -1.35
GTF3A-207ENST00000482655 ADMP35318 185 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 LRRC14Q15048 493 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 SMYD4Q8IYR2 804 aaPredicted RBP6.62□□□□□ -1.35
GTF3A-207ENST00000482655 STK35Q8TDR2 534 aa6.62□□□□□ -1.35
GTF3A-207ENST00000482655 FAM170BA6NMN3 283 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 ZNF252P-AS1Q0IIN9 211 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 LLGL2Q6P1M3 1020 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 DTX1Q86Y01 620 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 GPBAR1Q8TDU6 330 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 SSU72Q9NP77 194 aaKnown RBP6.61□□□□□ -1.35
GTF3A-207ENST00000482655 PICK1Q9NRD5 415 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 ANGEL1Q9UNK9 670 aaKnown RBP6.61□□□□□ -1.35
GTF3A-207ENST00000482655 PCDHGC5Q9Y5F6 944 aa6.61□□□□□ -1.35
GTF3A-207ENST00000482655 DYNC1LI2O43237 492 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-207ENST00000482655 PAGE1O75459 146 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 HCLS1P14317 486 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-207ENST00000482655 HOXA10P31260 410 aaPredicted RBP6.6□□□□□ -1.35
GTF3A-207ENST00000482655 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
GTF3A-207ENST00000482655 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms