RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 GSX1Q9H4S2 264 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-214ENST00000480793 PRDM7Q9NQW5 492 aa4.55□□□□□ -1.68
R3HDM1-214ENST00000480793 STIM2Q9P246 746 aa4.55□□□□□ -1.68
R3HDM1-214ENST00000480793 TCAF2A6NFQ2 919 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 PRMT3O60678 531 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 KRT1P04264 644 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 CDK5R2Q13319 367 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 TTC16Q8NEE8 873 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 PPP1R12CQ9BZL4 782 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 BHLHE41Q9C0J9 482 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 CTNND2Q9UQB3 1225 aa4.54□□□□□ -1.68
R3HDM1-214ENST00000480793 CTSBP07858 339 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 EDN3P14138 238 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 PCSK2P16519 638 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 LMOD1P29536 600 aaPredicted RBP4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 ZP2Q05996 745 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 IKZF1Q13422 519 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 TMEM67Q5HYA8 995 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 XKR5Q6UX68 686 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 KIRREL1Q96J84 757 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 C20orf173Q96LM9 149 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 MKNK1Q9BUB5 465 aa4.53□□□□□ -1.68
R3HDM1-214ENST00000480793 ZBTB39O15060 712 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 NAA30Q147X3 362 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 SWI5Q1ZZU3 235 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 FYB2Q5VWT5 728 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 ASB11Q8WXH4 323 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 DIRC2Q96SL1 478 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 CORO1BQ9BR76 489 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 NSUN3Q9H649 340 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 PIDD1Q9HB75 910 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 CD320Q9NPF0 282 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 SNX11Q9Y5W9 270 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 U3KQE9 123 aa4.52□□□□□ -1.69
R3HDM1-214ENST00000480793 NUAK1O60285 661 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 ITIH2P19823 946 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 OXCT1P55809 520 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 ATG14Q6ZNE5 492 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 DDX54Q8TDD1 881 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 CHRDQ9H2X0 955 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 PLAGL2Q9UPG8 496 aa4.51□□□□□ -1.69
R3HDM1-214ENST00000480793 FOXD2O60548 495 aaPredicted RBP4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 AOC2O75106 756 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 SYN1P17600 705 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 PCDH1Q08174 1060 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 PDE3AQ14432 1141 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 OCLNQ16625 522 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 C8orf34Q49A92 452 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 CYFIP1Q7L576 1253 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 PARD6AQ9NPB6 346 aa4.5□□□□□ -1.69
R3HDM1-214ENST00000480793 ACIN1Q9UKV3 1341 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 EREGO14944 169 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 EDEM1Q92611 657 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 BORCS6Q96GS4 357 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 WDR18Q9BV38 432 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 TNKS2Q9H2K2 1166 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 CLEC4MQ9H2X3 399 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 EPB41L4BQ9H329 900 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 ATXN3LQ9H3M9 355 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 ZCCHC4Q9H5U6 513 aa4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 NOVA2Q9UNW9 492 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-214ENST00000480793 SYNGAP1Q96PV0 1343 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 PSPNO60542 156 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 PHACTR2O75167 634 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 LEFTY1O75610 366 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 MED14OSP0DP75 135 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 RFX1P22670 979 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 LINC00310P59036 64 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 DNM1Q05193 864 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 FLIIQ13045 1269 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 CAPN12Q6ZSI9 719 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 ATCAYQ86WG3 371 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 CALR3Q96L12 384 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 DUSP23Q9BVJ7 150 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 DCP1AQ9NPI6 582 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 PPP1R9AQ9ULJ8 1098 aa4.48□□□□□ -1.69
R3HDM1-214ENST00000480793 A6NHS1 94 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 METTL12A8MUP2 240 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 TMPRSS2O15393 492 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 ECEL1O95672 775 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 GLDCP23378 1020 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 SMYD4Q8IYR2 804 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 GGNBP2Q9H3C7 697 aa4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 CXXC1Q9P0U4 656 aaPredicted RBP4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 SMG5Q9UPR3 1016 aaKnown RBP4.47□□□□□ -1.69
R3HDM1-214ENST00000480793 A0A096LPE4 126 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 A0A0G2JLL6 359 aaPredicted RBP4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 A0A1W2PPZ6 126 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 PDGFAP04085 211 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 HNRNPUQ00839 825 aaKnown RBP eCLIP4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 NFIXQ14938 502 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 ZNF423Q2M1K9 1284 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 SNX29Q8TEQ0 813 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 TRIM56Q9BRZ2 755 aaKnown RBP4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 IRF2BPLQ9H1B7 796 aa4.46□□□□□ -1.7
R3HDM1-214ENST00000480793 ETV2O00321 342 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-214ENST00000480793 RNGTTO60942 597 aaKnown RBP4.45□□□□□ -1.7
R3HDM1-214ENST00000480793 BMP7P18075 431 aa4.45□□□□□ -1.7
R3HDM1-214ENST00000480793 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
R3HDM1-214ENST00000480793 TOP6BLQ8N6T0 577 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms