RNA–Protein interactions for RNA: ENST00000479576.5

CCDC13-205, Transcript of coiled-coil domain containing 13, humanhuman

TSL 3

Gene CCDC13, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-205ENST00000479576 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 INSM2Q96T92 566 aaPredicted RBP8.67□□□□□ -1.02
CCDC13-205ENST00000479576 GTPBP4Q9BZE4 634 aaKnown RBP8.67□□□□□ -1.02
CCDC13-205ENST00000479576 PDGFDQ9GZP0 370 aaPredicted RBP8.67□□□□□ -1.02
CCDC13-205ENST00000479576 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 ARHGEF10LQ9HCE6 1279 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
CCDC13-205ENST00000479576 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 CEP350Q5VT06 3117 aa8.67□□□□□ -1.02
CCDC13-205ENST00000479576 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 SOS1Q07889 1333 aaPredicted RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 STARD3NLO95772 234 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 GNRH1P01148 92 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 CDK11BP21127 795 aaKnown RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 NBPF10Q6P3W6 841 aaKnown RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 LRP10Q7Z4F1 713 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 NBPF15Q8N660 670 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
CCDC13-205ENST00000479576 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
CCDC13-205ENST00000479576 A0A1W2PRU2 124 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 RPS6KA4O75676 772 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 ANXA1P04083 346 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 PROSER3Q2NL68 480 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 TWISTNBQ3B726 338 aaPredicted RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 RAB6BQ9NRW1 208 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 PPP1R1BQ9UD71 204 aaPredicted RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
CCDC13-205ENST00000479576 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
CCDC13-205ENST00000479576 COL15A1P39059 1388 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 MEN1O00255 615 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 MAN1A2O60476 641 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 HOXB7P09629 217 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 MYL6BP14649 208 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 SSFA2P28290 1259 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 CTSOP43234 321 aaPredicted RBP8.64□□□□□ -1.03
CCDC13-205ENST00000479576 EIF5P55010 431 aaKnown RBP8.64□□□□□ -1.03
CCDC13-205ENST00000479576 CHPF2Q9P2E5 772 aa8.64□□□□□ -1.03
CCDC13-205ENST00000479576 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
CCDC13-205ENST00000479576 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 VAMP4O75379 141 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 PTMSP20962 102 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 IL6STP40189 918 aaPredicted RBP8.63□□□□□ -1.03
CCDC13-205ENST00000479576 GTF2IP78347 998 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 CLN3Q13286 438 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 TRAPPC3LQ5T215 181 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
CCDC13-205ENST00000479576 NLRP3Q96P20 1036 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 TMEM51Q9NW97 253 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
CCDC13-205ENST00000479576 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 ZBTB7AO95365 584 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
CCDC13-205ENST00000479576 MRE11P49959 708 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
CCDC13-205ENST00000479576 FOXD4L5Q5VV16 416 aaPredicted RBP8.62□□□□□ -1.03
CCDC13-205ENST00000479576 MSL1Q68DK7 614 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 TTLL7Q6ZT98 887 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 TRIM50Q86XT4 487 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 RNF217Q8TC41 542 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 SPON1Q9HCB6 807 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCDC13-205ENST00000479576 BCORQ6W2J9 1755 aa8.62□□□□□ -1.03
CCDC13-205ENST00000479576 NUP98P52948 1817 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 USP42Q9H9J4 1324 aaKnown RBP8.61□□□□□ -1.03
CCDC13-205ENST00000479576 CLGNO14967 610 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 IL2RAP01589 272 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 RFC4P35249 363 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 SCNN1DP51172 638 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 SLC20A2Q08357 652 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 AXDND1Q5T1B0 1012 aaPredicted RBP8.61□□□□□ -1.03
CCDC13-205ENST00000479576 CCDC30Q5VVM6 783 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 FLAD1Q8NFF5 587 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 XAGE3Q8WTP9 111 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 ESYT1Q9BSJ8 1104 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
CCDC13-205ENST00000479576 ETNK1Q9HBU6 452 aa8.61□□□□□ -1.03
CCDC13-205ENST00000479576 DBF4Q9UBU7 674 aaPredicted RBP8.61□□□□□ -1.03
CCDC13-205ENST00000479576 SCN7AQ01118 1682 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 A0A087WZG4 1122 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 FRAT2O75474 233 aaPredicted RBP8.6□□□□□ -1.03
CCDC13-205ENST00000479576 CAMTA2O94983 1202 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 STAU1O95793 577 aaKnown RBP8.6□□□□□ -1.03
CCDC13-205ENST00000479576 GYS1P13807 737 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 GPC1P35052 558 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 RNF144AP50876 292 aaPredicted RBP8.6□□□□□ -1.03
CCDC13-205ENST00000479576 AIMP1Q12904 312 aaKnown RBP8.6□□□□□ -1.03
CCDC13-205ENST00000479576 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
CCDC13-205ENST00000479576 COPS6Q7L5N1 327 aa8.6□□□□□ -1.03
CCDC13-205ENST00000479576 G2E3Q7L622 706 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms