RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CYB5R4Q7L1T6 521 aa28.52■■■□□ 2.16
SYNGAP1-206ENST00000479510 ARAP2Q8WZ64 1704 aa28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 IDH1O75874 414 aaKnown RBP28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 FILIP1Q7Z7B0 1213 aa28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 STRBPQ96SI9 672 aaKnown RBP28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 HPSEQ9Y251 543 aa28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 BCL9O00512 1426 aa28.51■■■□□ 2.15
SYNGAP1-206ENST00000479510 FGFR2P21802 821 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 GPTP24298 496 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 KRT40Q6A162 431 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 NBPF11Q86T75 865 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 VPS37DQ86XT2 251 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 SYNE4Q8N205 404 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 TRMT112Q9UI30 125 aaKnown RBP28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 NID2Q14112 1375 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 ZBTB43O43298 467 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 APPP05067 770 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 U2AF2P26368 475 aaKnown RBP eCLIP28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 PTPN14Q15678 1187 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 IGDCC4Q8TDY8 1250 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 TUBE1Q9UJT0 475 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 ITGB4P16144 1822 aa28.5■■■□□ 2.15
SYNGAP1-206ENST00000479510 MYO1BO43795 1136 aa28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 ARID5BQ14865 1188 aa28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 CCAR2Q8N163 923 aaKnown RBP28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 AIDAQ96BJ3 306 aa28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 CNNM2Q9H8M5 875 aa28.49■■■□□ 2.15
SYNGAP1-206ENST00000479510 A0A087WWV3 80 aa28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 PATL2C9JE40 543 aaKnown RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 WDHD1O75717 1129 aaPredicted RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 SYKP43405 635 aa28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 NCBP1Q09161 790 aaKnown RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 TRIM29Q14134 588 aa28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 PTPAQ15257 358 aa28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 ELOA2Q8IYF1 753 aaPredicted RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 ERCC4Q92889 916 aaPredicted RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.48■■■□□ 2.15
SYNGAP1-206ENST00000479510 FAM177BA6PVY3 158 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 PHKA1P46020 1223 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 NTRK3Q16288 839 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 PPP4R3BQ5MIZ7 849 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 RAB11FIP4Q86YS3 637 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 WASF1Q92558 559 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 MTA3Q9BTC8 594 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 LY9Q9HBG7 655 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 GJB4Q9NTQ9 266 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 NRDCO43847 1150 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 TUBB4AP04350 444 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 IL6STP40189 918 aaPredicted RBP28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 IARSP41252 1262 aaKnown RBP28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 DISP2A7MBM2 1401 aa28.47■■■□□ 2.15
SYNGAP1-206ENST00000479510 B4E1Z4 1266 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 NCAPHQ15003 741 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 MAP3K14Q99558 947 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 TIAM2Q8IVF5 1701 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 MROH7-TTC4A0A0A0MT08 1334 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 CUTAO60888 179 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 SLC5A1P13866 664 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 MAP3K12Q12852 859 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 RESP18Q5W5W9 173 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 ZNF34Q8IZ26 560 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 FEZ1Q99689 392 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 XPO4Q9C0E2 1151 aaKnown RBP28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 WWC3Q9ULE0 1092 aa28.46■■■□□ 2.15
SYNGAP1-206ENST00000479510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 GOLGA8AA7E2F4 631 aa28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 CDC27P30260 824 aa28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 GNL2Q13823 731 aaKnown RBP28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 TMEM67Q5HYA8 995 aa28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 KRT23Q9C075 422 aa28.45■■■□□ 2.14
SYNGAP1-206ENST00000479510 NFXL1Q6ZNB6 911 aa28.44■■■□□ 2.14
SYNGAP1-206ENST00000479510 SPATA5Q8NB90 893 aa28.44■■■□□ 2.14
SYNGAP1-206ENST00000479510 IFNKQ9P0W0 207 aa28.44■■■□□ 2.14
SYNGAP1-206ENST00000479510 NUP98P52948 1817 aa28.44■■■□□ 2.14
SYNGAP1-206ENST00000479510 DOCK2Q92608 1830 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 KDM4FA0A1W2PPD8 638 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 PSDA5PKW4 1024 aaPredicted RBP28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 SMC2O95347 1197 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 GNAT2P19087 354 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 MICU3Q86XE3 530 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 IFNL3Q8IZI9 196 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 FAM217BQ9NTX9 383 aaPredicted RBP28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 CGNQ9P2M7 1197 aaKnown RBP28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 NHSL1Q5SYE7 1610 aa28.43■■■□□ 2.14
SYNGAP1-206ENST00000479510 USP27XA6NNY8 438 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 RCAN1P53805 252 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 SSRP1Q08945 709 aaKnown RBP28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 SHC4Q6S5L8 630 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 AIFM3Q96NN9 605 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 SLC4A9Q96Q91 983 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 NAPBQ9H115 298 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 DENND2AQ9ULE3 1009 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 ZBTB1Q9Y2K1 713 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 SLC12A7Q9Y666 1083 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 FMNL1O95466 1100 aaPredicted RBP28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 MARCKSP29966 332 aaPredicted RBP28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 KIF18AQ8NI77 898 aa28.42■■■□□ 2.14
SYNGAP1-206ENST00000479510 FBXW7Q969H0 707 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms