RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	ANKRD31	Q8N7Z5	1873 aa		32.22	■■■□□ 2.75
CHKB-208	ENST00000479003	CCT2	P78371	535 aa	Known RBP	32.21	■■■□□ 2.75
CHKB-208	ENST00000479003	BICD2	Q8TD16	824 aa		32.21	■■■□□ 2.75
CHKB-208	ENST00000479003	UQCRFS1P1	P0C7P4	283 aa		32.21	■■■□□ 2.75
CHKB-208	ENST00000479003	UBE4A	Q14139	1066 aa		32.21	■■■□□ 2.75
CHKB-208	ENST00000479003	NR1I2	O75469	434 aa		32.2	■■■□□ 2.75
CHKB-208	ENST00000479003	RASGRF1	Q13972	1273 aa		32.2	■■■□□ 2.75
CHKB-208	ENST00000479003	APPBP2	Q92624	585 aa		32.2	■■■□□ 2.75
CHKB-208	ENST00000479003	WASHC4	Q2M389	1173 aa		32.2	■■■□□ 2.74
CHKB-208	ENST00000479003	IMMT	Q16891	758 aa	Known RBP	32.19	■■■□□ 2.74
CHKB-208	ENST00000479003	CKAP2L	Q8IYA6	745 aa		32.19	■■■□□ 2.74
CHKB-208	ENST00000479003	NCOA5	Q9HCD5	579 aa	Known RBP	32.19	■■■□□ 2.74
CHKB-208	ENST00000479003	CHST3	Q7LGC8	479 aa		32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	PIBF1	Q8WXW3	757 aa		32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	ZNF830	Q96NB3	372 aa	Predicted RBP	32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	RCOR1	Q9UKL0	485 aa		32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	KLRG2	A4D1S0	409 aa	Predicted RBP	32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	ATL3	Q6DD88	541 aa		32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	MPND	Q8N594	471 aa		32.18	■■■□□ 2.74
CHKB-208	ENST00000479003	QSER1	Q2KHR3	1735 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	GYG1	P46976	350 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	PLCB2	Q00722	1185 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	PARP3	Q9Y6F1	533 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	KLRK1	P26718	216 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	SPATA5	Q8NB90	893 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	ANKRD2	Q9GZV1	360 aa		32.17	■■■□□ 2.74
CHKB-208	ENST00000479003	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.16	■■■□□ 2.74
CHKB-208	ENST00000479003	FGA	P02671	866 aa		32.16	■■■□□ 2.74
CHKB-208	ENST00000479003	TTC12	Q9H892	705 aa	Predicted RBP	32.16	■■■□□ 2.74
CHKB-208	ENST00000479003	ANO6	Q4KMQ2	910 aa		32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	RBM17	Q96I25	401 aa	Known RBP	32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	PUS7L	Q9H0K6	701 aa	Known RBP	32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	PIH1D3	Q9NQM4	214 aa	Known RBP	32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	BRIP1	Q9BX63	1249 aa		32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	NAP1L2	Q9ULW6	460 aa	Predicted RBP	32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	ZNF804B	A4D1E1	1349 aa		32.15	■■■□□ 2.74
CHKB-208	ENST00000479003	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.14	■■■□□ 2.74
CHKB-208	ENST00000479003	TPM3	P06753	285 aa		32.14	■■■□□ 2.73
CHKB-208	ENST00000479003	HOXA10	P31260	410 aa	Predicted RBP	32.14	■■■□□ 2.73
CHKB-208	ENST00000479003	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.14	■■■□□ 2.73
CHKB-208	ENST00000479003	ZNF396	Q96N95	335 aa	Predicted RBP	32.14	■■■□□ 2.73
CHKB-208	ENST00000479003	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.14	■■■□□ 2.73
CHKB-208	ENST00000479003	FOSB	P53539	338 aa		32.13	■■■□□ 2.73
CHKB-208	ENST00000479003	CBX8	Q9HC52	389 aa		32.13	■■■□□ 2.73
CHKB-208	ENST00000479003	HAND2	P61296	217 aa		32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	HSP90AA2P	Q14568	343 aa	Predicted RBP	32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	SASS6	Q6UVJ0	657 aa		32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	TTF1	Q15361	905 aa	Predicted RBP	32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	LUZP1	Q86V48	1076 aa		32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	FAM84B	Q96KN1	310 aa	Predicted RBP	32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	PKNOX2	Q96KN3	472 aa		32.12	■■■□□ 2.73
CHKB-208	ENST00000479003	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	32.12	■■■□□ 2.73	2e-6	■■■□□ 17.9
CHKB-208	ENST00000479003	FDPS	P14324	419 aa	Known RBP	32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	CEBPZ	Q03701	1054 aa	Known RBP	32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	ILDR1	Q86SU0	546 aa	Predicted RBP	32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	USP28	Q96RU2	1077 aa		32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	ANKIB1	Q9P2G1	1089 aa		32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	GPAA1	O43292	621 aa		32.11	■■■□□ 2.73
CHKB-208	ENST00000479003	PRC1	O43663	620 aa		32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	NOLC1	Q14978	699 aa	Known RBP eCLIP	32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	CAVIN4	Q5BKX8	364 aa		32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	ZSCAN25	Q6NSZ9	544 aa		32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	GPHN	Q9NQX3	736 aa	Predicted RBP	32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	WDR19	Q8NEZ3	1342 aa		32.1	■■■□□ 2.73
CHKB-208	ENST00000479003	IDH1	O75874	414 aa	Known RBP	32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	NCOA7	Q8NI08	942 aa		32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	CRAMP1	Q96RY5	1269 aa		32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	COL1A1	P02452	1464 aa	Predicted RBP	32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	COL11A2	P13942	1736 aa	Predicted RBP	32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	GOLGA6L6	A8MZA4	724 aa		32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	ADD2	P35612	726 aa		32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	TDRD7	Q8NHU6	1098 aa	Known RBP	32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	FTO	Q9C0B1	505 aa	Known RBP eCLIP	32.09	■■■□□ 2.73
CHKB-208	ENST00000479003	CAVIN2	O95810	425 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	TXNRD3	Q86VQ6	643 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	VPS37D	Q86XT2	251 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	CCAR1	Q8IX12	1150 aa	Known RBP	32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	CTAGE5	O15320	804 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	SRGN	P10124	158 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	SPTLC3	Q9NUV7	552 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	DOCK2	Q92608	1830 aa		32.08	■■■□□ 2.73
CHKB-208	ENST00000479003	IRS2	Q9Y4H2	1338 aa		32.07	■■■□□ 2.72
CHKB-208	ENST00000479003	ZNF213	O14771	459 aa		32.07	■■■□□ 2.72
CHKB-208	ENST00000479003	ANTXR2	P58335	489 aa		32.07	■■■□□ 2.72
CHKB-208	ENST00000479003	SLC9C2	Q5TAH2	1124 aa		32.07	■■■□□ 2.72
CHKB-208	ENST00000479003	XDH	P47989	1333 aa		32.07	■■■□□ 2.72
CHKB-208	ENST00000479003	FBXO33	Q7Z6M2	555 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	WWC3	Q9ULE0	1092 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	DHX16	O60231	1041 aa	Known RBP	32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	BBOX1	O75936	387 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	GPSM2	P81274	684 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	GUCY1B3	Q02153	619 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	GNL3L	Q9NVN8	582 aa	Known RBP	32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	HPS5	Q9UPZ3	1129 aa		32.06	■■■□□ 2.72
CHKB-208	ENST00000479003	UQCRHL	A0A096LP55	91 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	KLF18	A0A0U1RQI7	1052 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	UQCRH	P07919	91 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	RALYL	Q86SE5	291 aa	Known RBP	32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	KCNF1	Q9H3M0	494 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	PPFIA3	O75145	1194 aa		32.05	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms