RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 STX10O60499 249 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 TOP1P11387 765 aaKnown RBP15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 TUBB2AQ13885 445 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 RESP18Q5W5W9 173 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 TXLNBQ8N3L3 684 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 CCDC191Q8NCU4 936 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 APPBP2Q92624 585 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 DDX17Q92841 729 aaKnown RBP15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 TUBB2BQ9BVA1 445 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 UBXN6Q9BZV1 441 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 COL18A1P39060 1754 aa15.58■□□□□ 0.08
HLA-DMA-208ENST00000477541 M0R2C6 588 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 IGSF3O75054 1194 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 SERPINC1P01008 464 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 SLC39A6Q13433 755 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 REXO1L1PQ8IX06 675 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 NFATC2IPQ8NCF5 419 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 HSD3B7Q9H2F3 369 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 NDUFB9Q9Y6M9 179 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 STK36Q9NRP7 1315 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 ECM29Q5VYK3 1845 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 A0A1B0GUL7 405 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 GPS2Q13227 327 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 MSL3Q8N5Y2 521 aaKnown RBP15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
HLA-DMA-208ENST00000477541 SOS2Q07890 1332 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 LMOD1P29536 600 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 PLA2G4AP47712 749 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 TBX2Q13207 712 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 CFAP100Q494V2 611 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 CCDC102BQ68D86 513 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 PODXL2Q9NZ53 605 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 CEP126Q9P2H0 1117 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 BCL9LQ86UU0 1499 aa15.56■□□□□ 0.08
HLA-DMA-208ENST00000477541 MROH7-TTC4A0A0A0MT08 1334 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 CHGBP05060 677 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 TRDNQ13061 729 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 PTPAQ15257 358 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 RABGGTAQ92696 567 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 OSBP2Q969R2 916 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 ANGEL1Q9UNK9 670 aaKnown RBP15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 PPP2R2CQ9Y2T4 447 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 MEGF6O75095 1541 aa15.55■□□□□ 0.08
HLA-DMA-208ENST00000477541 NID2Q14112 1375 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 A0A087WWV3 80 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 ZNF213O14771 459 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 MUM1L1Q5H9M0 696 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 TMEM139Q8IV31 216 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 WASF1Q92558 559 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 ERCC4Q92889 916 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 TMEM87BQ96K49 555 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 ZNF512BQ96KM6 892 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 KIF28PB7ZC32 967 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 TULP2O00295 520 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 BIN1O00499 593 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 WDHD1O75717 1129 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 URI1O94763 535 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 FGAP02671 866 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 CASQ1P31415 396 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 ANTXR2P58335 489 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 TTC39AQ5SRH9 613 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 NT5DC1Q5TFE4 455 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 KANK3Q6NY19 840 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 KRBA2Q6ZNG9 492 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 VPS37DQ86XT2 251 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 MLKLQ8NB16 471 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 GJD4Q96KN9 370 aaPredicted RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 ALG1Q9BT22 464 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 NAA15Q9BXJ9 866 aaKnown RBP15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 PSD3Q9NYI0 1048 aa15.54■□□□□ 0.08
HLA-DMA-208ENST00000477541 VWA3AA6NCI4 1184 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 ATP5J2-PTCD1G3V325 749 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 PTCD1O75127 700 aaKnown RBP15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 TIMM10P62072 90 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 TRIM29Q14134 588 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 SHC4Q6S5L8 630 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 RSRC2Q7L4I2 434 aaKnown RBP15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 ENOX1Q8TC92 643 aaKnown RBP15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 CCDC34Q96HJ3 373 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 MAP3K14Q99558 947 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 BAG1Q99933 345 aaPredicted RBP15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 MRFAP1Q9Y605 127 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 C1orf167Q5SNV9 1468 aa15.53■□□□□ 0.08
HLA-DMA-208ENST00000477541 FOXP2O15409 715 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 ATP1A3P13637 1013 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 METAP2P50579 478 aaKnown RBP eCLIP15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 BRD3Q15059 726 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 TTLL5Q6EMB2 1281 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 CHST3Q7LGC8 479 aa15.52■□□□□ 0.08
HLA-DMA-208ENST00000477541 DEFB132Q7Z7B7 95 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms