RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 NOL10Q9BSC4 688 aaKnown RBP35.85■■■■□ 3.33
HOXB3-208ENST00000476342 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.85■■■■□ 3.333e-8■■□□□ 14.5
HOXB3-208ENST00000476342 BTDP43251 543 aa35.84■■■■□ 3.33
HOXB3-208ENST00000476342 MAGEB6Q8N7X4 407 aa35.84■■■■□ 3.33
HOXB3-208ENST00000476342 TRPM7Q96QT4 1865 aa35.84■■■■□ 3.33
HOXB3-208ENST00000476342 MYH7P12883 1935 aa35.84■■■■□ 3.33
HOXB3-208ENST00000476342 GPR75-ASB3A0A0A6YYF3 556 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 TRAF5O00463 557 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 CYP7A1P22680 504 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 CDC42EP5Q6NZY7 148 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 PLEKHM2Q8IWE5 1019 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 USP40Q9NVE5 1235 aa35.83■■■■□ 3.33
HOXB3-208ENST00000476342 SCAF8Q9UPN6 1271 aaKnown RBP35.83■■■■□ 3.33
HOXB3-208ENST00000476342 TNNI2P48788 182 aa35.82■■■■□ 3.32
HOXB3-208ENST00000476342 SLC9C2Q5TAH2 1124 aa35.82■■■■□ 3.32
HOXB3-208ENST00000476342 PPP2R3BQ9Y5P8 575 aa35.82■■■■□ 3.32
HOXB3-208ENST00000476342 BAG3O95817 575 aa35.81■■■■□ 3.32
HOXB3-208ENST00000476342 FKBP1CQ5VVH2 108 aa35.81■■■■□ 3.32
HOXB3-208ENST00000476342 DEFB129Q9H1M3 183 aa35.81■■■■□ 3.32
HOXB3-208ENST00000476342 OSBPL3Q9H4L5 887 aa35.81■■■■□ 3.32
HOXB3-208ENST00000476342 ZSCAN25Q6NSZ9 544 aa35.8■■■■□ 3.32
HOXB3-208ENST00000476342 TCP10L2B9ZVM9 353 aa35.79■■■■□ 3.32
HOXB3-208ENST00000476342 MAP4K4O95819 1239 aaPredicted RBP35.79■■■■□ 3.32
HOXB3-208ENST00000476342 PDE6AP16499 860 aa35.79■■■■□ 3.32
HOXB3-208ENST00000476342 KBTBD3Q8NAB2 608 aa35.79■■■■□ 3.32
HOXB3-208ENST00000476342 PPP4R2Q9NY27 417 aa35.79■■■■□ 3.32
HOXB3-208ENST00000476342 APLP1P51693 650 aa35.78■■■■□ 3.32
HOXB3-208ENST00000476342 CACNB3P54284 484 aa35.78■■■■□ 3.32
HOXB3-208ENST00000476342 ADGRA1Q86SQ6 560 aa35.78■■■■□ 3.32
HOXB3-208ENST00000476342 CDCA5Q96FF9 252 aa35.78■■■■□ 3.32
HOXB3-208ENST00000476342 PLCG2P16885 1265 aa35.77■■■■□ 3.32
HOXB3-208ENST00000476342 FMR1Q06787 632 aaKnown RBP eCLIP35.77■■■■□ 3.321e-8■□□□□ 9.5
HOXB3-208ENST00000476342 AATFQ9NY61 560 aaKnown RBP eCLIP35.77■■■■□ 3.32
HOXB3-208ENST00000476342 PDE4AP27815 886 aa35.76■■■■□ 3.32
HOXB3-208ENST00000476342 RASA3Q14644 834 aa35.76■■■■□ 3.32
HOXB3-208ENST00000476342 LRRFIP1Q32MZ4 808 aaKnown RBP35.76■■■■□ 3.32
HOXB3-208ENST00000476342 CERS3Q8IU89 383 aa35.76■■■■□ 3.32
HOXB3-208ENST00000476342 ZNF532Q9HCE3 1301 aa35.76■■■■□ 3.31
HOXB3-208ENST00000476342 HSPA6P17066 643 aa35.75■■■■□ 3.31
HOXB3-208ENST00000476342 DLK2Q6UY11 383 aa35.75■■■■□ 3.31
HOXB3-208ENST00000476342 FAM83AQ86UY5 434 aa35.75■■■■□ 3.31
HOXB3-208ENST00000476342 ZNF408Q9H9D4 720 aa35.75■■■■□ 3.31
HOXB3-208ENST00000476342 CELF2O95319 508 aaKnown RBP35.74■■■■□ 3.31
HOXB3-208ENST00000476342 ADD2P35612 726 aa35.74■■■■□ 3.31
HOXB3-208ENST00000476342 RHBDL3P58872 404 aa35.74■■■■□ 3.31
HOXB3-208ENST00000476342 PPP4CP60510 307 aa35.74■■■■□ 3.31
HOXB3-208ENST00000476342 NF2P35240 595 aa35.74■■■■□ 3.31
HOXB3-208ENST00000476342 IDI2Q9BXS1 227 aa35.74■■■■□ 3.31
HOXB3-208ENST00000476342 UBE3CQ15386 1083 aa35.73■■■■□ 3.31
HOXB3-208ENST00000476342 EVI5LQ96CN4 794 aa35.73■■■■□ 3.31
HOXB3-208ENST00000476342 FSD1Q9BTV5 496 aa35.73■■■■□ 3.31
HOXB3-208ENST00000476342 TCRBV5S4A2TA0A5A2 114 aa35.72■■■■□ 3.31
HOXB3-208ENST00000476342 TMEM88BA6NKF7 163 aa35.72■■■■□ 3.31
HOXB3-208ENST00000476342 ZFYP08048 801 aaPredicted RBP35.72■■■■□ 3.31
HOXB3-208ENST00000476342 MIGA1Q8NAN2 632 aa35.72■■■■□ 3.31
HOXB3-208ENST00000476342 NFIAQ12857 509 aa35.71■■■■□ 3.31
HOXB3-208ENST00000476342 PRAMEF18Q5VWM3 479 aa35.71■■■■□ 3.31
HOXB3-208ENST00000476342 TEX11Q8IYF3 940 aa35.71■■■■□ 3.31
HOXB3-208ENST00000476342 CNTNAP1P78357 1384 aa35.71■■■■□ 3.31
HOXB3-208ENST00000476342 RFX7Q2KHR2 1363 aa35.71■■■■□ 3.31
HOXB3-208ENST00000476342 SH3RF3Q8TEJ3 882 aaPredicted RBP35.7■■■■□ 3.31
HOXB3-208ENST00000476342 FAM151AQ8WW52 585 aa35.7■■■■□ 3.31
HOXB3-208ENST00000476342 RPAP1Q9BWH6 1393 aaPredicted RBP35.69■■■■□ 3.3
HOXB3-208ENST00000476342 MAGEB6P1A0A0J9YX57 407 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 WDHD1O75717 1129 aaPredicted RBP35.69■■■■□ 3.3
HOXB3-208ENST00000476342 SUPT20HL1Q3ZLR7 823 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 CST9Q5W186 159 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 TMEM39BQ9GZU3 492 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 CREBZFQ9NS37 354 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 FAM198AQ9UFP1 575 aa35.69■■■■□ 3.3
HOXB3-208ENST00000476342 TRIM6-TRIM34B2RNG4 842 aa35.68■■■■□ 3.3
HOXB3-208ENST00000476342 ENTPD3O75355 529 aa35.68■■■■□ 3.3
HOXB3-208ENST00000476342 RGS3P49796 1198 aa35.68■■■■□ 3.3
HOXB3-208ENST00000476342 TCP10Q12799 353 aa35.68■■■■□ 3.3
HOXB3-208ENST00000476342 AK9Q5TCS8 1911 aa35.68■■■■□ 3.3
HOXB3-208ENST00000476342 RNF113AO15541 343 aaKnown RBP35.67■■■■□ 3.3
HOXB3-208ENST00000476342 DYNLL1P63167 89 aaKnown RBP35.67■■■■□ 3.3
HOXB3-208ENST00000476342 PICALMQ13492 652 aa35.67■■■■□ 3.3
HOXB3-208ENST00000476342 CDK5RAP2Q96SN8 1893 aa35.67■■■■□ 3.3
HOXB3-208ENST00000476342 FOCADQ5VW36 1801 aa35.67■■■■□ 3.3
HOXB3-208ENST00000476342 NPM3O75607 178 aaKnown RBP35.66■■■■□ 3.3
HOXB3-208ENST00000476342 C2orf69Q8N8R5 385 aa35.66■■■■□ 3.3
HOXB3-208ENST00000476342 TEPSINQ96N21 525 aa35.66■■■■□ 3.3
HOXB3-208ENST00000476342 RIOK1Q9BRS2 568 aaKnown RBP35.66■■■■□ 3.3
HOXB3-208ENST00000476342 GBA2Q9HCG7 927 aaPredicted RBP35.66■■■■□ 3.3
HOXB3-208ENST00000476342 NBPF12Q5TAG4 269 aaPredicted RBP35.65■■■■□ 3.3
HOXB3-208ENST00000476342 TICAM2Q86XR7 235 aa35.65■■■■□ 3.3
HOXB3-208ENST00000476342 APPBP2Q92624 585 aa35.65■■■■□ 3.3
HOXB3-208ENST00000476342 RILPL2Q969X0 211 aa35.65■■■■□ 3.3
HOXB3-208ENST00000476342 DDX4Q9NQI0 724 aaKnown RBP35.65■■■■□ 3.3
HOXB3-208ENST00000476342 PAPPA2Q9BXP8 1791 aa35.64■■■■□ 3.3
HOXB3-208ENST00000476342 FKBP1BP68106 108 aa35.64■■■■□ 3.3
HOXB3-208ENST00000476342 SLFNL1Q499Z3 407 aa35.64■■■■□ 3.3
HOXB3-208ENST00000476342 HOOK2Q96ED9 719 aa35.64■■■■□ 3.3
HOXB3-208ENST00000476342 CHGBP05060 677 aa35.63■■■■□ 3.29
HOXB3-208ENST00000476342 TTC22Q5TAA0 569 aa35.63■■■■□ 3.29
HOXB3-208ENST00000476342 AIDAQ96BJ3 306 aa35.63■■■■□ 3.29
HOXB3-208ENST00000476342 ABT1Q9ULW3 272 aaKnown RBP35.63■■■■□ 3.29
HOXB3-208ENST00000476342 TGFBRAP1Q8WUH2 860 aa35.62■■■■□ 3.29
HOXB3-208ENST00000476342 CRNKL1Q9BZJ0 848 aaKnown RBP35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms