RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 SV2BQ7L1I2 683 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 SMG8Q8ND04 991 aaKnown RBP8.23□□□□□ -1.09
SSR3-206ENST00000476217 KRT82Q9NSB4 513 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 HIF3AQ9Y2N7 669 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 CUX2O14529 1486 aa8.23□□□□□ -1.09
SSR3-206ENST00000476217 WDR97A6NE52 1622 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 KIF27Q86VH2 1401 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 NME2P22392 152 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 MAOBP27338 520 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 TP53INP1Q96A56 240 aa8.22□□□□□ -1.09
SSR3-206ENST00000476217 NECAB3Q96P71 396 aaPredicted RBP8.22□□□□□ -1.09
SSR3-206ENST00000476217 TRIM56Q9BRZ2 755 aaKnown RBP8.22□□□□□ -1.09
SSR3-206ENST00000476217 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
SSR3-206ENST00000476217 ALX3O95076 343 aa8.21□□□□□ -1.1
SSR3-206ENST00000476217 RLBP1P12271 317 aa8.21□□□□□ -1.1
SSR3-206ENST00000476217 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
SSR3-206ENST00000476217 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
SSR3-206ENST00000476217 TPSG1Q9NRR2 321 aa8.21□□□□□ -1.1
SSR3-206ENST00000476217 TTF2Q9UNY4 1162 aaKnown RBP8.21□□□□□ -1.1
SSR3-206ENST00000476217 ABCA10Q8WWZ4 1543 aa8.2□□□□□ -1.1
SSR3-206ENST00000476217 GSTP1P09211 210 aaKnown RBP8.2□□□□□ -1.1
SSR3-206ENST00000476217 ST13P50502 369 aaKnown RBP8.2□□□□□ -1.1
SSR3-206ENST00000476217 LRRC14Q15048 493 aa8.2□□□□□ -1.1
SSR3-206ENST00000476217 SLC51AQ86UW1 340 aa8.2□□□□□ -1.1
SSR3-206ENST00000476217 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
SSR3-206ENST00000476217 MEGF10Q96KG7 1140 aa8.2□□□□□ -1.1
SSR3-206ENST00000476217 TARBP1Q13395 1621 aaKnown RBP8.19□□□□□ -1.1
SSR3-206ENST00000476217 DHX15O43143 795 aaKnown RBP8.19□□□□□ -1.1
SSR3-206ENST00000476217 ARNTP27540 789 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 DOC2BQ14184 412 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 TPTE2Q6XPS3 522 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
SSR3-206ENST00000476217 RAD18Q9NS91 495 aa8.19□□□□□ -1.1
SSR3-206ENST00000476217 ENC1O14682 589 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 GAS2O43903 313 aaKnown RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 SLFN14P0C7P3 912 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 ZNF157P51786 506 aaPredicted RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 C12orf50Q8NA57 414 aaPredicted RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 MYRFLQ96LU7 910 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
SSR3-206ENST00000476217 YIPF2Q9BWQ6 316 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 VTI1BQ9UEU0 232 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 IFT140Q96RY7 1462 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 KIF21BO75037 1637 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 ABCA5Q8WWZ7 1642 aa8.18□□□□□ -1.1
SSR3-206ENST00000476217 LOC105371045A0A1W2PR82 267 aa8.17□□□□□ -1.1
SSR3-206ENST00000476217 TIAF1O95411 115 aa8.17□□□□□ -1.1
SSR3-206ENST00000476217 DIEXFQ68CQ4 756 aaKnown RBP8.17□□□□□ -1.1
SSR3-206ENST00000476217 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
SSR3-206ENST00000476217 UBL7Q96S82 380 aaPredicted RBP8.17□□□□□ -1.1
SSR3-206ENST00000476217 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
SSR3-206ENST00000476217 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
SSR3-206ENST00000476217 GSC2O15499 205 aa8.16□□□□□ -1.1
SSR3-206ENST00000476217 RPS26P62854 115 aaKnown RBP8.16□□□□□ -1.1
SSR3-206ENST00000476217 SOX4Q06945 474 aaPredicted RBP8.16□□□□□ -1.1
SSR3-206ENST00000476217 GOLGA3Q08378 1498 aa8.16□□□□□ -1.1
SSR3-206ENST00000476217 CCDC85BQ15834 202 aaPredicted RBP8.16□□□□□ -1.1
SSR3-206ENST00000476217 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
SSR3-206ENST00000476217 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
SSR3-206ENST00000476217 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
SSR3-206ENST00000476217 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
SSR3-206ENST00000476217 AOC2O75106 756 aa8.15□□□□□ -1.1
SSR3-206ENST00000476217 TRIM37O94972 964 aa8.15□□□□□ -1.1
SSR3-206ENST00000476217 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
SSR3-206ENST00000476217 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
SSR3-206ENST00000476217 CBX8Q9HC52 389 aa8.15□□□□□ -1.1
SSR3-206ENST00000476217 RAXQ9Y2V3 346 aa8.15□□□□□ -1.1
SSR3-206ENST00000476217 CUL7Q14999 1698 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 TDRD9Q8NDG6 1382 aaKnown RBP8.14□□□□□ -1.11
SSR3-206ENST00000476217 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
SSR3-206ENST00000476217 DLGAP3O95886 979 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 ADH5P11766 374 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 LMNB1P20700 586 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 BMP6P22004 513 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 PREPP48147 710 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 ZNF252P-AS1Q0IIN9 211 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 LLGL2Q6P1M3 1020 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 KCNB2Q92953 911 aa8.14□□□□□ -1.11
SSR3-206ENST00000476217 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
SSR3-206ENST00000476217 ERICH3Q5RHP9 1530 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.13□□□□□ -1.11
SSR3-206ENST00000476217 DYRK3O43781 588 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 FBXO24O75426 580 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 CTSBP07858 339 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 USP11P51784 963 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 TAGLNQ01995 201 aaKnown RBP8.13□□□□□ -1.11
SSR3-206ENST00000476217 PWP1Q13610 501 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 AKAP4Q5JQC9 854 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 PCNX4Q63HM2 1172 aa8.13□□□□□ -1.11
SSR3-206ENST00000476217 FAM20CQ8IXL6 584 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms