RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 ORC3Q9UBD5 711 aaPredicted RBP9.24□□□□□ -0.93
CCDC93-208ENST00000474546 NRBP1Q9UHY1 535 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 ABCC6O95255 1503 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 ARFGEF1Q9Y6D6 1849 aa9.24□□□□□ -0.93
CCDC93-208ENST00000474546 NBPF7P0C2Y1 421 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 FBLN1P23142 703 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 PIP4K2AP48426 406 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 CLCN6P51797 869 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 MYL5Q02045 173 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 ST3GAL1Q11201 340 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 C1orf141Q5JVX7 400 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 CCDC144CPQ8IYA2 1237 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 AOPEPQ8N6M6 819 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 IL17REQ8NFR9 667 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 SNX27Q96L92 541 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 IL25Q9H293 177 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
CCDC93-208ENST00000474546 MYO1AQ9UBC5 1043 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 FHOD1Q9Y613 1164 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
CCDC93-208ENST00000474546 A0A0U1RQG5 324 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-208ENST00000474546 PPP6R2O75170 966 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 TADA3O75528 432 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 RPS6KA5O75582 802 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 TOP1P11387 765 aaKnown RBP9.22□□□□□ -0.93
CCDC93-208ENST00000474546 CASQ1P31415 396 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 TGFB2P61812 414 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 MAP9Q49MG5 647 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 Q6ZUG5 572 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 NSUN7Q8NE18 718 aaKnown RBP9.22□□□□□ -0.93
CCDC93-208ENST00000474546 FLAD1Q8NFF5 587 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 CTCFLQ8NI51 663 aaPredicted RBP9.22□□□□□ -0.93
CCDC93-208ENST00000474546 WASF1Q92558 559 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 CCDC51Q96ER9 411 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 FMNL2Q96PY5 1086 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 HAUS7Q99871 368 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 UBXN6Q9BZV1 441 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 MED4Q9NPJ6 270 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 DDX21Q9NR30 783 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC93-208ENST00000474546 TMEM51Q9NW97 253 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 SALL1Q9NSC2 1324 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 HEG1Q9ULI3 1381 aa9.22□□□□□ -0.93
CCDC93-208ENST00000474546 COL5A2P05997 1499 aaPredicted RBP9.21□□□□□ -0.93
CCDC93-208ENST00000474546 FAM237AA0A1B0GTK4 181 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 BTBD11A6QL63 1104 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 EXOC5O00471 708 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 SPTLC2O15270 562 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 MAP4K4O95819 1239 aaPredicted RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 GORABQ5T7V8 394 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 E4F1Q66K89 784 aaPredicted RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 SYT10Q6XYQ8 523 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 C11orf57Q6ZUT1 292 aaPredicted RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 HDXQ7Z353 690 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 KBTBD3Q8NAB2 608 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 IP6K1Q92551 441 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 RUBCNQ92622 972 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 RPGRIP1Q96KN7 1286 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 CTAGE1Q96RT6 745 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 PYM1Q9BRP8 204 aaKnown RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 COL25A1Q9BXS0 654 aaPredicted RBP9.21□□□□□ -0.94
CCDC93-208ENST00000474546 TMX1Q9H3N1 280 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 CHPF2Q9P2E5 772 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 TUBE1Q9UJT0 475 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 USP16Q9Y5T5 823 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 PASKQ96RG2 1323 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 KIF13BQ9NQT8 1826 aa9.21□□□□□ -0.94
CCDC93-208ENST00000474546 SEMA3EO15041 775 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 SERPINC1P01008 464 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 HMGB2P26583 209 aaKnown RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 GTF2E1P29083 439 aaPredicted RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 PLA2G5P39877 138 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 TXLNAP40222 546 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 USP8P40818 1118 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 UBASH3AP57075 661 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 NLRP6P59044 892 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 MAP3K9P80192 1104 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 FANCCQ00597 558 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 TMED8Q6PL24 325 aaPredicted RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 MLKLQ8NB16 471 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 FBXO18Q8NFZ0 1043 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 C8orf76Q96K31 380 aa9.2□□□□□ -0.94
CCDC93-208ENST00000474546 TACO1Q9BSH4 297 aaKnown RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
CCDC93-208ENST00000474546 PHAXQ9H814 394 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms