RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 SOX4Q06945 474 aaPredicted RBP11.8□□□□□ -0.52
SGCE-210ENST00000472326 PCNX4Q63HM2 1172 aa11.8□□□□□ -0.52
SGCE-210ENST00000472326 CRELD1Q96HD1 420 aa11.8□□□□□ -0.52
SGCE-210ENST00000472326 SEMA6BQ9H3T3 888 aa11.8□□□□□ -0.52
SGCE-210ENST00000472326 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
SGCE-210ENST00000472326 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
SGCE-210ENST00000472326 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.79□□□□□ -0.52
SGCE-210ENST00000472326 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
SGCE-210ENST00000472326 RGS22Q8NE09 1264 aa11.79□□□□□ -0.52
SGCE-210ENST00000472326 MYRFLQ96LU7 910 aa11.79□□□□□ -0.52
SGCE-210ENST00000472326 AP4E1Q9UPM8 1137 aa11.79□□□□□ -0.52
SGCE-210ENST00000472326 DYRK3O43781 588 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 BMP3P12645 472 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 UVSSAQ2YD98 709 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 PRR23CQ6ZRP0 262 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 C2CD4AQ8NCU7 369 aaPredicted RBP11.78□□□□□ -0.52
SGCE-210ENST00000472326 EMILIN2Q9BXX0 1053 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
SGCE-210ENST00000472326 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
SGCE-210ENST00000472326 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 H2AFB2P0C5Z0 115 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 MRPL58Q14197 206 aaKnown RBP11.77□□□□□ -0.53
SGCE-210ENST00000472326 SGO2Q562F6 1265 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 GPBAR1Q8TDU6 330 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 KRT82Q9NSB4 513 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 PPP1R9AQ9ULJ8 1098 aa11.77□□□□□ -0.53
SGCE-210ENST00000472326 RBM47A0AV96 593 aaKnown RBP11.76□□□□□ -0.53
SGCE-210ENST00000472326 K7ELQ4 463 aaPredicted RBP11.76□□□□□ -0.53
SGCE-210ENST00000472326 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
SGCE-210ENST00000472326 TTBK2Q6IQ55 1244 aa11.76□□□□□ -0.53
SGCE-210ENST00000472326 LLGL2Q6P1M3 1020 aa11.76□□□□□ -0.53
SGCE-210ENST00000472326 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
SGCE-210ENST00000472326 ACTL7BQ9Y614 415 aa11.76□□□□□ -0.53
SGCE-210ENST00000472326 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
SGCE-210ENST00000472326 F6X3S4 739 aa11.75□□□□□ -0.53
SGCE-210ENST00000472326 ST13P50502 369 aaKnown RBP11.75□□□□□ -0.53
SGCE-210ENST00000472326 FAM20CQ8IXL6 584 aa11.75□□□□□ -0.53
SGCE-210ENST00000472326 ACSBG1Q96GR2 724 aa11.75□□□□□ -0.53
SGCE-210ENST00000472326 KIF4BQ2VIQ3 1234 aa11.74□□□□□ -0.53
SGCE-210ENST00000472326 CDPF1Q6NVV7 123 aa11.74□□□□□ -0.53
SGCE-210ENST00000472326 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
SGCE-210ENST00000472326 RAXQ9Y2V3 346 aa11.74□□□□□ -0.53
SGCE-210ENST00000472326 TMPRSS2O15393 492 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 ITGB7P26010 798 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 RXRBP28702 533 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 USP11P51784 963 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 LRRC14Q15048 493 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 FBLIM1Q8WUP2 373 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 FAM105AQ9NUU6 356 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 STOML1Q9UBI4 398 aa11.73□□□□□ -0.53
SGCE-210ENST00000472326 HMX2A2RU54 273 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 ADAM23O75077 832 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 SLFN14P0C7P3 912 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 MAP4P27816 1152 aaKnown RBP11.72□□□□□ -0.53
SGCE-210ENST00000472326 LIG3P49916 1009 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 CYP8B1Q9UNU6 501 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
SGCE-210ENST00000472326 RAB6AP20340 208 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 ITGAEP38570 1179 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 ASPAP45381 313 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 ID3Q02535 119 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
SGCE-210ENST00000472326 TRIM42Q8IWZ5 723 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 CACNA2D2Q9NY47 1150 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 TLR6Q9Y2C9 796 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 HIF3AQ9Y2N7 669 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 PCDHB5Q9Y5E4 795 aa11.71□□□□□ -0.53
SGCE-210ENST00000472326 TRIM37O94972 964 aa11.7□□□□□ -0.54
SGCE-210ENST00000472326 PRSS36Q5K4E3 855 aa11.7□□□□□ -0.54
SGCE-210ENST00000472326 NOC4LQ9BVI4 516 aaKnown RBP11.7□□□□□ -0.54
SGCE-210ENST00000472326 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
SGCE-210ENST00000472326 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
SGCE-210ENST00000472326 CSADQ9Y600 493 aa11.7□□□□□ -0.54
SGCE-210ENST00000472326 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
SGCE-210ENST00000472326 HNRNPUQ00839 825 aaKnown RBP eCLIP11.69□□□□□ -0.54
SGCE-210ENST00000472326 FANCD2OSQ96PS1 177 aa11.69□□□□□ -0.54
SGCE-210ENST00000472326 PCDHA4Q9UN74 947 aa11.69□□□□□ -0.54
SGCE-210ENST00000472326 DCDC2CA8MYV0 355 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 SEPT6Q14141 434 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 ZC3H12AQ5D1E8 599 aaKnown RBP11.68□□□□□ -0.54
SGCE-210ENST00000472326 LDLRAD1Q5T700 205 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 GAL3ST3Q96A11 431 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 FAM83CQ9BQN1 747 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 DISC1Q9NRI5 854 aa11.68□□□□□ -0.54
SGCE-210ENST00000472326 LMNB1P20700 586 aa11.67□□□□□ -0.54
SGCE-210ENST00000472326 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.67□□□□□ -0.54
SGCE-210ENST00000472326 AGMOQ6ZNB7 445 aa11.67□□□□□ -0.54
SGCE-210ENST00000472326 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
SGCE-210ENST00000472326 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
SGCE-210ENST00000472326 GSX1Q9H4S2 264 aaPredicted RBP11.67□□□□□ -0.54
SGCE-210ENST00000472326 FAM95CA0A1B0GW59 222 aa11.66□□□□□ -0.54
SGCE-210ENST00000472326 NFICP08651 508 aa11.66□□□□□ -0.54
SGCE-210ENST00000472326 TFE3P19532 575 aaPredicted RBP11.66□□□□□ -0.54
SGCE-210ENST00000472326 FSTP19883 344 aa11.66□□□□□ -0.54
SGCE-210ENST00000472326 RPS26P62854 115 aaKnown RBP11.66□□□□□ -0.54
SGCE-210ENST00000472326 NFKBIBQ15653 356 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms