RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 FGD1P98174 961 aa30.7■■■□□ 2.5
U2AF1-208ENST00000471250 MFSD14BQ5SR56 506 aa30.69■■■□□ 2.5
U2AF1-208ENST00000471250 CRNKL1Q9BZJ0 848 aaKnown RBP30.69■■■□□ 2.5
U2AF1-208ENST00000471250 SNED1Q8TER0 1413 aa30.69■■■□□ 2.5
U2AF1-208ENST00000471250 GTF2IP78347 998 aa30.68■■■□□ 2.5
U2AF1-208ENST00000471250 NECAB1Q8N987 351 aa30.68■■■□□ 2.5
U2AF1-208ENST00000471250 TNPO1Q92973 898 aaKnown RBP30.68■■■□□ 2.5
U2AF1-208ENST00000471250 ZNF219Q9P2Y4 722 aaPredicted RBP30.68■■■□□ 2.5
U2AF1-208ENST00000471250 PRC1O43663 620 aa30.68■■■□□ 2.5
U2AF1-208ENST00000471250 CTDSPL2Q05D32 466 aa30.68■■■□□ 2.5
U2AF1-208ENST00000471250 MYH2Q9UKX2 1941 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 ZBTB7AO95365 584 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 ANTXR2P58335 489 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 DOK7Q18PE1 504 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 AKNAD1Q5T1N1 836 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 CHST3Q7LGC8 479 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 STAG1Q8WVM7 1258 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 ANAPC4Q9UJX5 808 aa30.67■■■□□ 2.5
U2AF1-208ENST00000471250 MROH7-TTC4A0A0A0MT08 1334 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 PPP4CP60510 307 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 TTLL6Q8N841 843 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 MTFR1LQ9H019 292 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 ATP8A2Q9NTI2 1148 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 SMC3Q9UQE7 1217 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 SUGT1Q9Y2Z0 365 aa30.66■■■□□ 2.5
U2AF1-208ENST00000471250 PPARAQ07869 468 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 DIXDC1Q155Q3 683 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 CNNM2Q9H8M5 875 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 TACC3Q9Y6A5 838 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 NEDD4P46934 1319 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 G3V3G9 751 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 BAG3O95817 575 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 DPEP1P16444 411 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 KCNA3P22001 575 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 PKP1Q13835 747 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 GRIPAP1Q4V328 841 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 DCAF8Q5TAQ9 597 aa30.65■■■□□ 2.5
U2AF1-208ENST00000471250 UPF1Q92900 1129 aaKnown RBP eCLIP30.65■■■□□ 2.5
U2AF1-208ENST00000471250 BAZ2AQ9UIF9 1905 aaKnown RBP30.64■■■□□ 2.5
U2AF1-208ENST00000471250 EVCP57679 992 aa30.64■■■□□ 2.5
U2AF1-208ENST00000471250 APOBRQ0VD83 1088 aa30.64■■■□□ 2.5
U2AF1-208ENST00000471250 PODNQ7Z5L7 613 aa30.64■■■□□ 2.5
U2AF1-208ENST00000471250 SLF2Q8IX21 1173 aa30.64■■■□□ 2.5
U2AF1-208ENST00000471250 FAM163AQ96GL9 167 aaPredicted RBP30.64■■■□□ 2.5
U2AF1-208ENST00000471250 POLD1P28340 1107 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 MFSD6Q6ZSS7 791 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 CERS3Q8IU89 383 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 SUPT20HQ8NEM7 779 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 GTF3C6Q969F1 213 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 NOL10Q9BSC4 688 aaKnown RBP30.63■■■□□ 2.49
U2AF1-208ENST00000471250 KRT23Q9C075 422 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 ATF5Q9Y2D1 282 aaPredicted RBP30.63■■■□□ 2.49
U2AF1-208ENST00000471250 ZDHHC9Q9Y397 364 aa30.63■■■□□ 2.49
U2AF1-208ENST00000471250 B4E1Z4 1266 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 PFKFB2O60825 505 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 STK3Q13188 491 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 CYB5R4Q7L1T6 521 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 ZNF274Q96GC6 653 aaPredicted RBP30.62■■■□□ 2.49
U2AF1-208ENST00000471250 RNF41Q9H4P4 317 aaPredicted RBP30.62■■■□□ 2.49
U2AF1-208ENST00000471250 DCP1AQ9NPI6 582 aaPredicted RBP30.62■■■□□ 2.49
U2AF1-208ENST00000471250 CTR9Q6PD62 1173 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 NKX2-3Q8TAU0 364 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 INCENPQ9NQS7 918 aa30.62■■■□□ 2.49
U2AF1-208ENST00000471250 GPR75-ASB3A0A0A6YYF3 556 aa30.61■■■□□ 2.49
U2AF1-208ENST00000471250 MINDY4BA8MYZ0 360 aa30.61■■■□□ 2.49
U2AF1-208ENST00000471250 C21orf2O43822 256 aa30.61■■■□□ 2.49
U2AF1-208ENST00000471250 BRD1O95696 1058 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 GJB2P29033 226 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 TGFB2P61812 414 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 R3HDM1Q15032 1099 aaKnown RBP30.6■■■□□ 2.49
U2AF1-208ENST00000471250 CLEC17AQ6ZS10 378 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 SH3RF3Q8TEJ3 882 aaPredicted RBP30.6■■■□□ 2.49
U2AF1-208ENST00000471250 FBXW7Q969H0 707 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 DBNDD1Q9H9R9 158 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 GPHNQ9NQX3 736 aaPredicted RBP30.6■■■□□ 2.49
U2AF1-208ENST00000471250 GAKO14976 1311 aa30.6■■■□□ 2.49
U2AF1-208ENST00000471250 MCM4P33991 863 aa30.59■■■□□ 2.49
U2AF1-208ENST00000471250 SBK1Q52WX2 424 aa30.59■■■□□ 2.49
U2AF1-208ENST00000471250 TMEM87BQ96K49 555 aa30.59■■■□□ 2.49
U2AF1-208ENST00000471250 LAMB1P07942 1786 aa30.59■■■□□ 2.49
U2AF1-208ENST00000471250 CCDC93Q567U6 631 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 CERS5Q8N5B7 392 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 GBP4Q96PP9 640 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 USP17L12C9JPN9 530 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 USP17L21D6R901 530 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 PDIA3P30101 505 aaKnown RBP30.58■■■□□ 2.49
U2AF1-208ENST00000471250 BTDP43251 543 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 KIAA2012Q0VF49 1180 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 SCRN1Q12765 414 aa30.58■■■□□ 2.49
U2AF1-208ENST00000471250 ARPP21Q9UBL0 812 aaPredicted RBP30.58■■■□□ 2.49
U2AF1-208ENST00000471250 MKRN1Q9UHC7 482 aaKnown RBP30.58■■■□□ 2.49
U2AF1-208ENST00000471250 SH2B2O14492 632 aaPredicted RBP30.57■■■□□ 2.48
U2AF1-208ENST00000471250 RTKN2Q8IZC4 609 aa30.57■■■□□ 2.48
U2AF1-208ENST00000471250 ZSWIM5Q9P217 1185 aa30.57■■■□□ 2.48
U2AF1-208ENST00000471250 ECE2O60344 883 aa30.56■■■□□ 2.48
U2AF1-208ENST00000471250 KDM4AO75164 1064 aa30.56■■■□□ 2.48
U2AF1-208ENST00000471250 PCP11498 1178 aaKnown RBP30.56■■■□□ 2.48
U2AF1-208ENST00000471250 PLCG2P16885 1265 aa30.56■■■□□ 2.48
U2AF1-208ENST00000471250 FKBP1AP62942 108 aaKnown RBP30.56■■■□□ 2.48
U2AF1-208ENST00000471250 ANGEL1Q9UNK9 670 aaKnown RBP30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms