RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 RNF217Q8TC41 542 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 MED4Q9NPJ6 270 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 CLIC4Q9Y696 253 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 VWA3AA6NCI4 1184 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 SERPINC1P01008 464 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 PFKFB1P16118 471 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 CASQ1P31415 396 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 TUBB4BP68371 445 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 PIP4K2BP78356 416 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 GUCY1B3Q02153 619 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 ZMYM1Q5SVZ6 1142 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 ANO1Q5XXA6 986 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 MSL3Q8N5Y2 521 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 RETREG2Q8NC44 543 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 ORAI2Q96SN7 254 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 METTL22Q9BUU2 404 aaPredicted RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 UTP14AQ9BVJ6 771 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 PPP2R2CQ9Y2T4 447 aa13□□□□□ -0.33
SRGAP3-204ENST00000470951 AFDNP55196 1824 aaKnown RBP13□□□□□ -0.33
SRGAP3-204ENST00000470951 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 BIN1O00499 593 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 STX10O60499 249 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 PDIA6Q15084 440 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 CFAP100Q494V2 611 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 NBPF10Q6P3W6 841 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 BSDC1Q9NW68 430 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 ATF5Q9Y2D1 282 aaPredicted RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 MRFAP1Q9Y605 127 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 FAM237AA0A1B0GTK4 181 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 SLC39A14Q15043 492 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 BRD3Q15059 726 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 TMEM139Q8IV31 216 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 IQUBQ8NA54 791 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 KCNH5Q8NCM2 988 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 GOLGA5Q8TBA6 731 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 DBNDD2Q9BQY9 259 aa12.99□□□□□ -0.33
SRGAP3-204ENST00000470951 SLIT3O75094 1523 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 FANCGO15287 622 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 SASH3O75995 380 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 SEC31AO94979 1220 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 HSPD1P10809 573 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 ATP1A3P13637 1013 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 PPP2R3AQ06190 1150 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 KRBA2Q6ZNG9 492 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 GOLGA1Q92805 767 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 MST1RQ04912 1400 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
SRGAP3-204ENST00000470951 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 PPP6R2O75170 966 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 SYKP43405 635 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 AIMP1Q12904 312 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 FUT8Q9BYC5 575 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 PAG1Q9NWQ8 432 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 HPSEQ9Y251 543 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 PXDNQ92626 1479 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 DDX17Q92841 729 aaKnown RBP12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 SGSM3Q96HU1 749 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 BAG1Q99933 345 aaPredicted RBP12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 DCCP43146 1447 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SRGAP3-204ENST00000470951 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 CCDC189A1A4V9 331 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 POLR3DP05423 398 aaPredicted RBP12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 TXLNAP40222 546 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 GNG11P61952 73 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 ST5P78524 1137 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 PARD6BQ9BYG5 372 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 C5P01031 1676 aa12.96□□□□□ -0.33
SRGAP3-204ENST00000470951 MAP2K7O14733 419 aa12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 TOM1O60784 492 aa12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 GSCP56915 257 aaPredicted RBP12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 KIF23Q02241 960 aaPredicted RBP12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 DPF2Q92785 391 aa12.96□□□□□ -0.34
SRGAP3-204ENST00000470951 MAP3K15Q6ZN16 1313 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 KIFC2Q96AC6 838 aa12.95□□□□□ -0.34
SRGAP3-204ENST00000470951 MYD88Q99836 296 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms