RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SLC3A2P08195 630 aaKnown RBP11.61□□□□□ -0.55
CCM2-204ENST00000470837 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
CCM2-204ENST00000470837 PPP4CP60510 307 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
CCM2-204ENST00000470837 TRDNQ13061 729 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 NECTIN1Q15223 517 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 ALX1Q15699 326 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 GRIK5Q16478 980 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 GIMAP6Q6P9H5 292 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 TEX11Q8IYF3 940 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 IFNL3Q8IZI9 196 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 RIOK1Q9BRS2 568 aaKnown RBP11.61□□□□□ -0.55
CCM2-204ENST00000470837 TMOD2Q9NZR1 351 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
CCM2-204ENST00000470837 GAKO14976 1311 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 KIAA1551Q9HCM1 1747 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
CCM2-204ENST00000470837 USP17L8P0C7I0 530 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 CRKP46108 304 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 CXCL9Q07325 125 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 RALYLQ86SE5 291 aaKnown RBP11.6□□□□□ -0.55
CCM2-204ENST00000470837 HSCBQ8IWL3 235 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
CCM2-204ENST00000470837 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 ZMYM6O95789 1325 aa11.6□□□□□ -0.55
CCM2-204ENST00000470837 GSG1L2A8MUP6 293 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 PRKAB2O43741 272 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 MYO1BO43795 1136 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
CCM2-204ENST00000470837 FGD1P98174 961 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 BLOC1S2Q6QNY1 142 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 SH3RF3Q8TEJ3 882 aaPredicted RBP11.59□□□□□ -0.55
CCM2-204ENST00000470837 ZNF384Q8TF68 577 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 SDR42E1Q8WUS8 393 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 ZDHHC15Q96MV8 337 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
CCM2-204ENST00000470837 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 RNF181Q9P0P0 153 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
CCM2-204ENST00000470837 CYP46A1Q9Y6A2 500 aa11.59□□□□□ -0.55
CCM2-204ENST00000470837 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 FZD9O00144 591 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
CCM2-204ENST00000470837 CYP21A2P08686 494 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 YBX3P16989 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCM2-204ENST00000470837 MCM2P49736 904 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 NEK4P51957 841 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 HAND2P61296 217 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 CFAP100Q494V2 611 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 TGFBRAP1Q8WUH2 860 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 KCNB2Q92953 911 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 NEK1Q96PY6 1258 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 TM6SF1Q9BZW5 370 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 CNNM2Q9H8M5 875 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 ZNF287Q9HBT7 754 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 PALD1Q9ULE6 856 aa11.58□□□□□ -0.56
CCM2-204ENST00000470837 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
CCM2-204ENST00000470837 MYH13Q9UKX3 1938 aa11.57□□□□□ -0.56
CCM2-204ENST00000470837 MFSD6Q6ZSS7 791 aa11.57□□□□□ -0.56
CCM2-204ENST00000470837 RASEFQ8IZ41 740 aa11.57□□□□□ -0.56
CCM2-204ENST00000470837 NCOA7Q8NI08 942 aa11.57□□□□□ -0.56
CCM2-204ENST00000470837 DCP1AQ9NPI6 582 aaPredicted RBP11.57□□□□□ -0.56
CCM2-204ENST00000470837 DOCK2Q92608 1830 aa11.57□□□□□ -0.56
CCM2-204ENST00000470837 MAST2Q6P0Q8 1798 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 USP17L21D6R901 530 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 E7EWF7 191 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 H7C1D1 291 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 HSP90AA1P07900 732 aaKnown RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 PCP11498 1178 aaKnown RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 PDE4BQ07343 736 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 PPARAQ07869 468 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 PICALMQ13492 652 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 C9orf131Q5VYM1 1079 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 APOBEC3HQ6NTF7 200 aaKnown RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 DPY19L2Q6NUT2 758 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 MAPKAPK5Q8IW41 473 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 GPC2Q8N158 579 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 DPF2Q92785 391 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 IPO9Q96P70 1041 aaKnown RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 KRT23Q9C075 422 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 EPB41L4AQ9HCS5 686 aaPredicted RBP11.56□□□□□ -0.56
CCM2-204ENST00000470837 PDRG1Q9NUG6 133 aa11.56□□□□□ -0.56
CCM2-204ENST00000470837 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
CCM2-204ENST00000470837 FOXP2O15409 715 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 HLA-DOAP06340 250 aa11.55□□□□□ -0.56
CCM2-204ENST00000470837 GMPSP49915 693 aaPredicted RBP11.55□□□□□ -0.56
CCM2-204ENST00000470837 RHBDL3P58872 404 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms