RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 TPCN1Q9ULQ1 816 aa11.33□□□□□ -0.6
SRPRB-202ENST00000466636 SLC4A4Q9Y6R1 1079 aa11.33□□□□□ -0.6
SRPRB-202ENST00000466636 CACNA1SQ13698 1873 aa11.32□□□□□ -0.6
SRPRB-202ENST00000466636 APPP05067 770 aa11.32□□□□□ -0.6
SRPRB-202ENST00000466636 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 DYNLL1P63167 89 aaKnown RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
SRPRB-202ENST00000466636 MB21D2Q8IYB1 491 aaPredicted RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 RTFDC1Q9BY42 306 aaPredicted RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
SRPRB-202ENST00000466636 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 ME3Q16798 604 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 DCAF8Q5TAQ9 597 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
SRPRB-202ENST00000466636 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.67e-7■■■■■ 35.3
SRPRB-202ENST00000466636 EYA3Q99504 573 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 AGXT2Q9BYV1 514 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 NACAP1Q9BZK3 213 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 ZC3H12CQ9C0D7 883 aaKnown RBP11.31□□□□□ -0.6
SRPRB-202ENST00000466636 NAPBQ9H115 298 aa11.31□□□□□ -0.6
SRPRB-202ENST00000466636 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
SRPRB-202ENST00000466636 ZBTB7AO95365 584 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 DPEP1P16444 411 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 KCNA3P22001 575 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 TDO2P48775 406 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 ANTXR2P58335 489 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 GSTO1P78417 241 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 GIMAP6Q6P9H5 292 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 Q6ZUG5 572 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 NCOA7Q8NI08 942 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 MTFR1LQ9H019 292 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 MAST2Q6P0Q8 1798 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 WDR19Q8NEZ3 1342 aa11.3□□□□□ -0.6
SRPRB-202ENST00000466636 LDHCP07864 332 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 PPP4CP60510 307 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 GTF2IP78347 998 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 EVX2Q03828 476 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 DOK7Q18PE1 504 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 MFSD14BQ5SR56 506 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 STAG1Q8WVM7 1258 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 BRF1Q92994 677 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 ANP32EQ9BTT0 268 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 LRRC2Q9BYS8 371 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRPRB-202ENST00000466636 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 NEDD4P46934 1319 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 TIAM2Q8IVF5 1701 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 MYH7P12883 1935 aa11.29□□□□□ -0.6
SRPRB-202ENST00000466636 PRC1O43663 620 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 MCM5P33992 734 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 EVCP57679 992 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 NUCB2P80303 420 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 CTDSPL2Q05D32 466 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 PPARAQ07869 468 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 AKNAD1Q5T1N1 836 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 RALYLQ86SE5 291 aaKnown RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 CERS5Q8N5B7 392 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 TTLL6Q8N841 843 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
SRPRB-202ENST00000466636 GAKO14976 1311 aa11.28□□□□□ -0.6
SRPRB-202ENST00000466636 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 C21orf2O43822 256 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 POLD1P28340 1107 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 TRDNQ13061 729 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 PKP1Q13835 747 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 CYB5R4Q7L1T6 521 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 CHST3Q7LGC8 479 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
SRPRB-202ENST00000466636 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 SGIP1Q9BQI5 828 aa11.27□□□□□ -0.61
SRPRB-202ENST00000466636 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
SRPRB-202ENST00000466636 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
SRPRB-202ENST00000466636 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms