RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF70Q9UC06 446 aaPredicted RBP20.56■□□□□ 0.88
USP39-211ENST00000465282 PPP2R3BQ9Y5P8 575 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
USP39-211ENST00000465282 TNNI2P48788 182 aa20.55■□□□□ 0.88
USP39-211ENST00000465282 LRRFIP1Q32MZ4 808 aaKnown RBP20.55■□□□□ 0.88
USP39-211ENST00000465282 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
USP39-211ENST00000465282 USP48Q86UV5 1035 aa20.55■□□□□ 0.88
USP39-211ENST00000465282 TICAM2Q86XR7 235 aa20.55■□□□□ 0.88
USP39-211ENST00000465282 BAG3O95817 575 aa20.54■□□□□ 0.88
USP39-211ENST00000465282 PLCG2P16885 1265 aa20.54■□□□□ 0.88
USP39-211ENST00000465282 GLIS2Q9BZE0 524 aaPredicted RBP20.54■□□□□ 0.88
USP39-211ENST00000465282 CLRN2A0PK11 232 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 PPP4CP60510 307 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 SLC9C2Q5TAH2 1124 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 TSHZ3Q63HK5 1081 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 CDC42EP5Q6NZY7 148 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 FAM83AQ86UY5 434 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 MAGEB6Q8N7X4 407 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 DEFB129Q9H1M3 183 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 VEZTQ9HBM0 779 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 PPP4R2Q9NY27 417 aa20.53■□□□□ 0.88
USP39-211ENST00000465282 CYP7A1P22680 504 aa20.52■□□□□ 0.88
USP39-211ENST00000465282 BTDP43251 543 aa20.52■□□□□ 0.88
USP39-211ENST00000465282 EDC3Q96F86 508 aaKnown RBP20.52■□□□□ 0.88
USP39-211ENST00000465282 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
USP39-211ENST00000465282 NPM3O75607 178 aaKnown RBP20.51■□□□□ 0.87
USP39-211ENST00000465282 PDE6AP16499 860 aa20.51■□□□□ 0.87
USP39-211ENST00000465282 APLP1P51693 650 aa20.51■□□□□ 0.87
USP39-211ENST00000465282 IDI2Q9BXS1 227 aa20.51■□□□□ 0.87
USP39-211ENST00000465282 ADM5C9JUS6 153 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 TRAF5O00463 557 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 ZFYP08048 801 aaPredicted RBP20.5■□□□□ 0.87
USP39-211ENST00000465282 ADD2P35612 726 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 UBE3CQ15386 1083 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 AK9Q5TCS8 1911 aa20.5■□□□□ 0.87
USP39-211ENST00000465282 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 HSPA6P17066 643 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 NF2P35240 595 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 RHBDL3P58872 404 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 RASA3Q14644 834 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 SUPT20HL1Q3ZLR7 823 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 CDCA5Q96FF9 252 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 CDK5RAP2Q96SN8 1893 aa20.49■□□□□ 0.87
USP39-211ENST00000465282 TCRBV5S4A2TA0A5A2 114 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 TMEM88BA6NKF7 163 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 TCP10L2B9ZVM9 353 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 ENTPD3O75355 529 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 FAM151AQ8WW52 585 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 HOOK2Q96ED9 719 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 AATFQ9NY61 560 aaKnown RBP eCLIP20.48■□□□□ 0.87
USP39-211ENST00000465282 ZNF532Q9HCE3 1301 aa20.48■□□□□ 0.87
USP39-211ENST00000465282 RPAP1Q9BWH6 1393 aaPredicted RBP20.47■□□□□ 0.87
USP39-211ENST00000465282 PDE4AP27815 886 aa20.47■□□□□ 0.87
USP39-211ENST00000465282 ADGRA1Q86SQ6 560 aa20.47■□□□□ 0.87
USP39-211ENST00000465282 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
USP39-211ENST00000465282 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
USP39-211ENST00000465282 WDHD1O75717 1129 aaPredicted RBP20.46■□□□□ 0.87
USP39-211ENST00000465282 CELF2O95319 508 aaKnown RBP20.46■□□□□ 0.87
USP39-211ENST00000465282 FKBP1BP68106 108 aa20.46■□□□□ 0.87
USP39-211ENST00000465282 CST9Q5W186 159 aa20.46■□□□□ 0.87
USP39-211ENST00000465282 TEX11Q8IYF3 940 aa20.46■□□□□ 0.87
USP39-211ENST00000465282 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
USP39-211ENST00000465282 MAGEB6P1A0A0J9YX57 407 aa20.45■□□□□ 0.86
USP39-211ENST00000465282 RNF113AO15541 343 aaKnown RBP20.45■□□□□ 0.86
USP39-211ENST00000465282 CACNB3P54284 484 aa20.45■□□□□ 0.86
USP39-211ENST00000465282 C2orf69Q8N8R5 385 aa20.45■□□□□ 0.86
USP39-211ENST00000465282 FSD1Q9BTV5 496 aa20.45■□□□□ 0.86
USP39-211ENST00000465282 FAM198AQ9UFP1 575 aa20.45■□□□□ 0.86
USP39-211ENST00000465282 SCAF8Q9UPN6 1271 aaKnown RBP20.45■□□□□ 0.86
USP39-211ENST00000465282 COL2A1P02458 1487 aaPredicted RBP20.44■□□□□ 0.86
USP39-211ENST00000465282 TRIM6-TRIM34B2RNG4 842 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 RGS3P49796 1198 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 NFIAQ12857 509 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 MIGA1Q8NAN2 632 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 SH3RF3Q8TEJ3 882 aaPredicted RBP20.44■□□□□ 0.86
USP39-211ENST00000465282 APPBP2Q92624 585 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 TEPSINQ96N21 525 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 RIOK1Q9BRS2 568 aaKnown RBP20.44■□□□□ 0.86
USP39-211ENST00000465282 PAPPA2Q9BXP8 1791 aa20.44■□□□□ 0.86
USP39-211ENST00000465282 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
USP39-211ENST00000465282 FMR1Q06787 632 aaKnown RBP eCLIP20.43■□□□□ 0.863e-6■■■□□ 16.1
USP39-211ENST00000465282 TMEM39BQ9GZU3 492 aa20.43■□□□□ 0.86
USP39-211ENST00000465282 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
USP39-211ENST00000465282 GBA2Q9HCG7 927 aaPredicted RBP20.43■□□□□ 0.86
USP39-211ENST00000465282 DYNLL1P63167 89 aaKnown RBP20.42■□□□□ 0.86
USP39-211ENST00000465282 TCP10Q12799 353 aa20.42■□□□□ 0.86
USP39-211ENST00000465282 TTC22Q5TAA0 569 aa20.42■□□□□ 0.86
USP39-211ENST00000465282 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
USP39-211ENST00000465282 DLK2Q6UY11 383 aa20.42■□□□□ 0.86
USP39-211ENST00000465282 CRNKL1Q9BZJ0 848 aaKnown RBP20.42■□□□□ 0.86
USP39-211ENST00000465282 MYH1P12882 1939 aa20.41■□□□□ 0.86
USP39-211ENST00000465282 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
USP39-211ENST00000465282 NBPF12Q5TAG4 269 aaPredicted RBP20.41■□□□□ 0.86
USP39-211ENST00000465282 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
USP39-211ENST00000465282 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
USP39-211ENST00000465282 DHX36Q9H2U1 1008 aaKnown RBP20.41■□□□□ 0.86
USP39-211ENST00000465282 ATRNL1Q5VV63 1379 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms