RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 TAOK2Q9UL54 1235 aa12.76□□□□□ -0.37
RTF1-202ENST00000462276 ZMYM6O95789 1325 aa12.76□□□□□ -0.37
RTF1-202ENST00000462276 MYO1BO43795 1136 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 SEC24BO95487 1268 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 CHGBP05060 677 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 APPP05067 770 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
RTF1-202ENST00000462276 RBM25P49756 843 aaKnown RBP12.75□□□□□ -0.37
RTF1-202ENST00000462276 NT5C2P49902 561 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
RTF1-202ENST00000462276 SCNN1DP51172 638 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 ANAPC15P60006 121 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 FKBP1CQ5VVH2 108 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 ARMT1Q9H993 441 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 AATFQ9NY61 560 aaKnown RBP eCLIP12.75□□□□□ -0.37
RTF1-202ENST00000462276 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
RTF1-202ENST00000462276 GJA3Q9Y6H8 435 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 SLC4A4Q9Y6R1 1079 aa12.75□□□□□ -0.37
RTF1-202ENST00000462276 COL4A5P29400 1685 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 HSPA4P34932 840 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
RTF1-202ENST00000462276 RHBDL3P58872 404 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 CCDC129Q6ZRS4 1044 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 LCORLQ8N3X6 602 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
RTF1-202ENST00000462276 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 IL25Q9H293 177 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
RTF1-202ENST00000462276 CNOT7Q9UIV1 285 aaKnown RBP12.74□□□□□ -0.37
RTF1-202ENST00000462276 ZNF541Q9H0D2 1346 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 FGAP02671 866 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 PCP11498 1178 aaKnown RBP12.73□□□□□ -0.37
RTF1-202ENST00000462276 LMOD1P29536 600 aaPredicted RBP12.73□□□□□ -0.37
RTF1-202ENST00000462276 PTH1RQ03431 593 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 KRT32Q14532 448 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 NECTIN1Q15223 517 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 TEX11Q8IYF3 940 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 IFNL3Q8IZI9 196 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 KCNB2Q92953 911 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 IL17RAQ96F46 866 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 ZBED3Q96IU2 234 aaPredicted RBP12.73□□□□□ -0.37
RTF1-202ENST00000462276 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 NAPBQ9H115 298 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 MYOZ2Q9NPC6 264 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
RTF1-202ENST00000462276 CACNA1SQ13698 1873 aa12.73□□□□□ -0.37
RTF1-202ENST00000462276 CEP350Q5VT06 3117 aa12.72□□□□□ -0.37
RTF1-202ENST00000462276 USP5P45974 858 aa12.72□□□□□ -0.37
RTF1-202ENST00000462276 DYNLL1P63167 89 aaKnown RBP12.72□□□□□ -0.37
RTF1-202ENST00000462276 IMMTQ16891 758 aaKnown RBP12.72□□□□□ -0.37
RTF1-202ENST00000462276 SBK1Q52WX2 424 aa12.72□□□□□ -0.37
RTF1-202ENST00000462276 CDC42EP5Q6NZY7 148 aa12.72□□□□□ -0.37
RTF1-202ENST00000462276 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
RTF1-202ENST00000462276 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
RTF1-202ENST00000462276 IQCA1LA6NCM1 817 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 ZNF213O14771 459 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 ENTPD3O75355 529 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 DDNO94850 711 aaPredicted RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 SLC3A2P08195 630 aaKnown RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 TDO2P48775 406 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 TNFAIP1Q13829 316 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 VPS53Q5VIR6 699 aa12.71□□□□□ -0.37
RTF1-202ENST00000462276 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 DCP1AQ9NPI6 582 aaPredicted RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 ADARB2Q9NS39 739 aaKnown RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 ARPP21Q9UBL0 812 aaPredicted RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 MKRN1Q9UHC7 482 aaKnown RBP12.71□□□□□ -0.37
RTF1-202ENST00000462276 WNT10BO00744 389 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 FOXP2O15409 715 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 PRKAB2O43741 272 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
RTF1-202ENST00000462276 HMGB1P09429 215 aaKnown RBP12.7□□□□□ -0.38
RTF1-202ENST00000462276 PSMA5P28066 241 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 TTC6Q86TZ1 520 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 TGFBRAP1Q8WUH2 860 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 TM6SF1Q9BZW5 370 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
RTF1-202ENST00000462276 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
RTF1-202ENST00000462276 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 ANAPC4Q9UJX5 808 aa12.7□□□□□ -0.38
RTF1-202ENST00000462276 CHD4Q14839 1912 aa12.69□□□□□ -0.38
RTF1-202ENST00000462276 SLC27A2O14975 620 aa12.69□□□□□ -0.38
RTF1-202ENST00000462276 TNNI2P48788 182 aa12.69□□□□□ -0.38
RTF1-202ENST00000462276 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
RTF1-202ENST00000462276 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
RTF1-202ENST00000462276 SDR42E1Q8WUS8 393 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms