RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 BTDP43251 543 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 RHBDL3P58872 404 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 ANGEL2Q5VTE6 544 aaKnown RBP13.65□□□□□ -0.22
SSBP1-202ENST00000461433 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
SSBP1-202ENST00000461433 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSBP1-202ENST00000461433 ZNF70Q9UC06 446 aaPredicted RBP13.65□□□□□ -0.22
SSBP1-202ENST00000461433 CLRN2A0PK11 232 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 RNF113AO15541 343 aaKnown RBP13.64□□□□□ -0.23
SSBP1-202ENST00000461433 SDSP20132 328 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 PPP4CP60510 307 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 GGA3Q9NZ52 723 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 SCAF8Q9UPN6 1271 aaKnown RBP13.64□□□□□ -0.23
SSBP1-202ENST00000461433 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
SSBP1-202ENST00000461433 TOMM70O94826 608 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 DYNLL1P63167 89 aaKnown RBP13.63□□□□□ -0.23
SSBP1-202ENST00000461433 MAP1SQ66K74 1059 aaPredicted RBP13.63□□□□□ -0.23
SSBP1-202ENST00000461433 ZSCAN25Q6NSZ9 544 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 RIOK1Q9BRS2 568 aaKnown RBP13.63□□□□□ -0.23
SSBP1-202ENST00000461433 USP40Q9NVE5 1235 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 AATFQ9NY61 560 aaKnown RBP eCLIP13.63□□□□□ -0.23
SSBP1-202ENST00000461433 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 FOCADQ5VW36 1801 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 MYO1BO43795 1136 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 CACNB3P54284 484 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 TICAM2Q86XR7 235 aa13.63□□□□□ -0.23
SSBP1-202ENST00000461433 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
SSBP1-202ENST00000461433 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
SSBP1-202ENST00000461433 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-202ENST00000461433 ZFYP08048 801 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-202ENST00000461433 ZMYM1Q5SVZ6 1142 aa13.62□□□□□ -0.23
SSBP1-202ENST00000461433 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
SSBP1-202ENST00000461433 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
SSBP1-202ENST00000461433 SH3RF3Q8TEJ3 882 aaPredicted RBP13.62□□□□□ -0.23
SSBP1-202ENST00000461433 OSBP2Q969R2 916 aa13.62□□□□□ -0.23
SSBP1-202ENST00000461433 CNTNAP1P78357 1384 aa13.62□□□□□ -0.23
SSBP1-202ENST00000461433 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-202ENST00000461433 BAG3O95817 575 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 NFIAQ12857 509 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 APPBP2Q92624 585 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
SSBP1-202ENST00000461433 SEC62Q99442 399 aaKnown RBP13.61□□□□□ -0.23
SSBP1-202ENST00000461433 IDI2Q9BXS1 227 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 GLIS2Q9BZE0 524 aaPredicted RBP13.61□□□□□ -0.23
SSBP1-202ENST00000461433 FAM198AQ9UFP1 575 aa13.61□□□□□ -0.23
SSBP1-202ENST00000461433 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 TCP10L2B9ZVM9 353 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 ADM5C9JUS6 153 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 M0R2C6 588 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 FKBP1CQ5VVH2 108 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 USP48Q86UV5 1035 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 APOBEC3FQ8IUX4 373 aaKnown RBP13.6□□□□□ -0.23
SSBP1-202ENST00000461433 LCORLQ8N3X6 602 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
SSBP1-202ENST00000461433 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
SSBP1-202ENST00000461433 FMR1Q06787 632 aaKnown RBP eCLIP13.59□□□□□ -0.23
SSBP1-202ENST00000461433 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
SSBP1-202ENST00000461433 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 NOL10Q9BSC4 688 aaKnown RBP13.59□□□□□ -0.23
SSBP1-202ENST00000461433 ARMT1Q9H993 441 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 TRAF5O00463 557 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 MBD4O95243 580 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 PLCG2P16885 1265 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 NMIQ13287 307 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-202ENST00000461433 RASA3Q14644 834 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 FAM83AQ86UY5 434 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 SULF1Q8IWU6 871 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 TEX11Q8IYF3 940 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
SSBP1-202ENST00000461433 NPM3O75607 178 aaKnown RBP13.58□□□□□ -0.24
SSBP1-202ENST00000461433 TCP10Q12799 353 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 TEPSINQ96N21 525 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.24
SSBP1-202ENST00000461433 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
SSBP1-202ENST00000461433 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
SSBP1-202ENST00000461433 PASKQ96RG2 1323 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 GPAA1O43292 621 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 PRKAB2O43741 272 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 ENTPD3O75355 529 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 CHMLP26374 656 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 FSTL1Q12841 308 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 TNFAIP1Q13829 316 aa13.57□□□□□ -0.24
SSBP1-202ENST00000461433 CCDC129Q6ZRS4 1044 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms