RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 MB21D2Q8IYB1 491 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-205ENST00000460485 FAM184AQ8NB25 1140 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 GPT2Q8TD30 523 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 TMEM87BQ96K49 555 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
ERCC3-205ENST00000460485 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
ERCC3-205ENST00000460485 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
ERCC3-205ENST00000460485 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
ERCC3-205ENST00000460485 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
ERCC3-205ENST00000460485 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
ERCC3-205ENST00000460485 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
ERCC3-205ENST00000460485 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 PATL2C9JE40 543 aaKnown RBP16.56■□□□□ 0.24
ERCC3-205ENST00000460485 FOXP2O15409 715 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 CDKL5O76039 1030 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 PCP11498 1178 aaKnown RBP16.56■□□□□ 0.24
ERCC3-205ENST00000460485 RCAN1P53805 252 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 CCDC183Q5T5S1 534 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 TBC1D9BQ66K14 1250 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 USP48Q86UV5 1035 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
ERCC3-205ENST00000460485 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
ERCC3-205ENST00000460485 RNF41Q9H4P4 317 aaPredicted RBP16.56■□□□□ 0.24
ERCC3-205ENST00000460485 MKRN1Q9UHC7 482 aaKnown RBP16.56■□□□□ 0.24
ERCC3-205ENST00000460485 NID2Q14112 1375 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 TAF1P21675 1872 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 H3BQV1 296 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 PRC1O43663 620 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 SCRN1Q12765 414 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 FOXD4L5Q5VV16 416 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-205ENST00000460485 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 FOXD4L4Q8WXT5 416 aaPredicted RBP16.55■□□□□ 0.24
ERCC3-205ENST00000460485 KRT23Q9C075 422 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 CFAP45Q9UL16 551 aa16.55■□□□□ 0.24
ERCC3-205ENST00000460485 CNTNAP1P78357 1384 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 LRRC37AA6NMS7 1700 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 CHGBP05060 677 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 RPS8P62241 208 aaKnown RBP16.54■□□□□ 0.24
ERCC3-205ENST00000460485 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
ERCC3-205ENST00000460485 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
ERCC3-205ENST00000460485 HELBQ8NG08 1087 aaPredicted RBP16.54■□□□□ 0.24
ERCC3-205ENST00000460485 TCEANC2Q96MN5 208 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 NAPBQ9H115 298 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 DLEC1Q9Y238 1755 aa16.54■□□□□ 0.24
ERCC3-205ENST00000460485 PDIA3P30101 505 aaKnown RBP16.53■□□□□ 0.24
ERCC3-205ENST00000460485 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 VPS37DQ86XT2 251 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 MAGEB6Q8N7X4 407 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 LARP6Q9BRS8 491 aaKnown RBP16.53■□□□□ 0.24
ERCC3-205ENST00000460485 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
ERCC3-205ENST00000460485 MINPP1Q9UNW1 487 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
ERCC3-205ENST00000460485 PTPDC1A2A3K4 754 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 NASPP49321 788 aaPredicted RBP16.52■□□□□ 0.24
ERCC3-205ENST00000460485 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 STK3Q13188 491 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 SART3Q15020 963 aaKnown RBP16.52■□□□□ 0.24
ERCC3-205ENST00000460485 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 CERS3Q8IU89 383 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 WBP1LQ9NX94 342 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 TMEM63CQ9P1W3 806 aa16.52■□□□□ 0.24
ERCC3-205ENST00000460485 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.23
ERCC3-205ENST00000460485 COL4A1P02462 1669 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 NFKBIEO00221 500 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 FIBPO43427 364 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 MBD4O95243 580 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 APPP05067 770 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 LIFRP42702 1097 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 BCAMP50895 628 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-205ENST00000460485 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 SGMS1Q86VZ5 419 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 STAG1Q8WVM7 1258 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 ZNF396Q96N95 335 aaPredicted RBP16.51■□□□□ 0.23
ERCC3-205ENST00000460485 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
ERCC3-205ENST00000460485 DICER1Q9UPY3 1922 aaKnown RBP16.51■□□□□ 0.23
ERCC3-205ENST00000460485 RGS19P49795 217 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 DNM1Q05193 864 aaKnown RBP16.5■□□□□ 0.23
ERCC3-205ENST00000460485 RESTQ13127 1097 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 C15orf52Q6ZUT6 534 aaKnown RBP16.5■□□□□ 0.23
ERCC3-205ENST00000460485 TMC4Q7Z404 712 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 ANAPC4Q9UJX5 808 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
ERCC3-205ENST00000460485 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
ERCC3-205ENST00000460485 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
ERCC3-205ENST00000460485 H0YIN7 160 aa16.49■□□□□ 0.23
ERCC3-205ENST00000460485 SH2B2O14492 632 aaPredicted RBP16.49■□□□□ 0.23
ERCC3-205ENST00000460485 CPLX1O14810 134 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms