RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 NOS3P29474 1203 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 IREB2P48200 963 aaKnown RBP10.38□□□□□ -0.75
CKAP2-204ENST00000459902 HDLBPQ00341 1268 aaKnown RBP10.38□□□□□ -0.75
CKAP2-204ENST00000459902 PDE3AQ14432 1141 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 LRRC14Q15048 493 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 NPM2Q86SE8 214 aaKnown RBP10.38□□□□□ -0.75
CKAP2-204ENST00000459902 METTL16Q86W50 562 aaKnown RBP10.38□□□□□ -0.75
CKAP2-204ENST00000459902 RELL1Q8IUW5 271 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 TMEM151AQ8N4L1 468 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 PHC3Q8NDX5 983 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 RNF208Q9H0X6 261 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 KBTBD4Q9NVX7 518 aa10.38□□□□□ -0.75
CKAP2-204ENST00000459902 ZNF862O60290 1169 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 TMEM74Q96NL1 305 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 KRT82Q9NSB4 513 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 CACNA2D2Q9NY47 1150 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 PCDHB5Q9Y5E4 795 aa10.37□□□□□ -0.75
CKAP2-204ENST00000459902 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
CKAP2-204ENST00000459902 ITGB2P05107 769 aa10.36□□□□□ -0.75
CKAP2-204ENST00000459902 TCF3P15923 654 aa10.36□□□□□ -0.75
CKAP2-204ENST00000459902 TFE3P19532 575 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-204ENST00000459902 GBP2P32456 591 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-204ENST00000459902 HP1BP3Q5SSJ5 553 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-204ENST00000459902 IGSF5Q9NSI5 407 aa10.36□□□□□ -0.75
CKAP2-204ENST00000459902 AOC2O75106 756 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 TRIM37O94972 964 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 PWP1Q13610 501 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 NUTM2GQ5VZR2 741 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 TXNRD3Q86VQ6 643 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 GPBAR1Q8TDU6 330 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 WDR18Q9BV38 432 aa10.35□□□□□ -0.75
CKAP2-204ENST00000459902 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
CKAP2-204ENST00000459902 KIF4BQ2VIQ3 1234 aa10.34□□□□□ -0.75
CKAP2-204ENST00000459902 PLA2G4EQ3MJ16 856 aa10.34□□□□□ -0.75
CKAP2-204ENST00000459902 Q6ZS46 218 aa10.34□□□□□ -0.75
CKAP2-204ENST00000459902 SMG8Q8ND04 991 aaKnown RBP10.34□□□□□ -0.75
CKAP2-204ENST00000459902 RHOVQ96L33 236 aa10.34□□□□□ -0.75
CKAP2-204ENST00000459902 RAD18Q9NS91 495 aa10.34□□□□□ -0.75
CKAP2-204ENST00000459902 PF4P02776 101 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 GLB1P16278 677 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 LMNB1P20700 586 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 SCARA3Q6AZY7 606 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
CKAP2-204ENST00000459902 SUGCTQ9HAC7 445 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 CYP4F12Q9HCS2 524 aa10.33□□□□□ -0.76
CKAP2-204ENST00000459902 DRD2P14416 443 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 LMNB2Q03252 620 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 CAMK2GQ13555 558 aaPredicted RBP10.32□□□□□ -0.76
CKAP2-204ENST00000459902 SEPT6Q14141 434 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 AKAP4Q5JQC9 854 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 ANKRD34AQ69YU3 496 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 USP48Q86UV5 1035 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 NT5DC4Q86YG4 428 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 TRIM42Q8IWZ5 723 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 GAL3ST3Q96A11 431 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 MEGF10Q96KG7 1140 aa10.32□□□□□ -0.76
CKAP2-204ENST00000459902 UBL7Q96S82 380 aaPredicted RBP10.32□□□□□ -0.76
CKAP2-204ENST00000459902 TIAF1O95411 115 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 SLFN14P0C7P3 912 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 GATA4P43694 442 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 RACK1P63244 317 aaKnown RBP10.31□□□□□ -0.76
CKAP2-204ENST00000459902 FAM160A1Q05DH4 1040 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 FDX2Q6P4F2 183 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
CKAP2-204ENST00000459902 ACSBG1Q96GR2 724 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 DDX41Q9UJV9 622 aaKnown RBP10.31□□□□□ -0.76
CKAP2-204ENST00000459902 PCDHGC5Q9Y5F6 944 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 PCDHGB7Q9Y5F8 929 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 SYNGAP1Q96PV0 1343 aa10.31□□□□□ -0.76
CKAP2-204ENST00000459902 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
CKAP2-204ENST00000459902 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
CKAP2-204ENST00000459902 CEP41Q9BYV8 373 aa10.3□□□□□ -0.76
CKAP2-204ENST00000459902 MIR1-1HGQ9H1L0 117 aa10.3□□□□□ -0.76
CKAP2-204ENST00000459902 PPP1R9AQ9ULJ8 1098 aa10.3□□□□□ -0.76
CKAP2-204ENST00000459902 PCDHA4Q9UN74 947 aa10.3□□□□□ -0.76
CKAP2-204ENST00000459902 ADH5P11766 374 aa10.29□□□□□ -0.76
CKAP2-204ENST00000459902 GARTP22102 1010 aa10.29□□□□□ -0.76
CKAP2-204ENST00000459902 EIF4A3P38919 411 aaKnown RBP10.29□□□□□ -0.76
CKAP2-204ENST00000459902 PREPP48147 710 aa10.29□□□□□ -0.76
CKAP2-204ENST00000459902 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
CKAP2-204ENST00000459902 FBXL19Q6PCT2 694 aa10.29□□□□□ -0.76
CKAP2-204ENST00000459902 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.29□□□□□ -0.76
CKAP2-204ENST00000459902 ADAMTS1Q9UHI8 967 aa10.29□□□□□ -0.76
CKAP2-204ENST00000459902 RAD51AP2Q09MP3 1159 aa10.28□□□□□ -0.76
CKAP2-204ENST00000459902 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
CKAP2-204ENST00000459902 BNC2Q6ZN30 1099 aaPredicted RBP10.28□□□□□ -0.76
CKAP2-204ENST00000459902 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
CKAP2-204ENST00000459902 GOLM1Q8NBJ4 401 aa10.28□□□□□ -0.76
CKAP2-204ENST00000459902 FAM46AQ96IP4 442 aaKnown RBP10.28□□□□□ -0.76
CKAP2-204ENST00000459902 SSBP4Q9BWG4 385 aaPredicted RBP10.28□□□□□ -0.76
CKAP2-204ENST00000459902 TMPRSS2O15393 492 aa10.27□□□□□ -0.77
CKAP2-204ENST00000459902 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.77
CKAP2-204ENST00000459902 CDK8P49336 464 aa10.27□□□□□ -0.77
CKAP2-204ENST00000459902 ID3Q02535 119 aa10.27□□□□□ -0.77
CKAP2-204ENST00000459902 INPP5AQ14642 412 aa10.27□□□□□ -0.77
CKAP2-204ENST00000459902 ZNF296Q8WUU4 475 aaPredicted RBP10.27□□□□□ -0.77
CKAP2-204ENST00000459902 KCNQ5Q9NR82 932 aa10.27□□□□□ -0.77
CKAP2-204ENST00000459902 CRIM1Q9NZV1 1036 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms