RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 MARCKSP29966 332 aaPredicted RBP23.98■■□□□ 1.43
CRAT-207ENST00000458362 RBM6P78332 1123 aaKnown RBP23.98■■□□□ 1.43
CRAT-207ENST00000458362 NBPF11Q86T75 865 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 CCDC69A6NI79 296 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 CMA1P23946 247 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 CCZ1BP86790 482 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 CCZ1P86791 482 aaPredicted RBP23.98■■□□□ 1.43
CRAT-207ENST00000458362 SLC39A14Q15043 492 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 KRT40Q6A162 431 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 IGDCC4Q8TDY8 1250 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 CCDC94Q9BW85 323 aaPredicted RBP23.98■■□□□ 1.43
CRAT-207ENST00000458362 TACC3Q9Y6A5 838 aa23.98■■□□□ 1.43
CRAT-207ENST00000458362 DISP2A7MBM2 1401 aa23.97■■□□□ 1.43
CRAT-207ENST00000458362 SNAP23O00161 211 aa23.97■■□□□ 1.43
CRAT-207ENST00000458362 SLC3A2P08195 630 aaKnown RBP23.97■■□□□ 1.43
CRAT-207ENST00000458362 UQCRFS1P1P0C7P4 283 aa23.97■■□□□ 1.43
CRAT-207ENST00000458362 MICU3Q86XE3 530 aa23.97■■□□□ 1.43
CRAT-207ENST00000458362 DZIP3Q86Y13 1208 aaKnown RBP23.97■■□□□ 1.43
CRAT-207ENST00000458362 EPB41L4AQ9HCS5 686 aaPredicted RBP23.97■■□□□ 1.43
CRAT-207ENST00000458362 NEMFO60524 1076 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 SKILP12757 684 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 PUM3Q15397 648 aaKnown RBP23.96■■□□□ 1.43
CRAT-207ENST00000458362 VPS37DQ86XT2 251 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 MYL10Q9BUA6 226 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 LY9Q9HBG7 655 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 FAM217BQ9NTX9 383 aaPredicted RBP23.96■■□□□ 1.43
CRAT-207ENST00000458362 SMTNL1A8MU46 457 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 RANBP6O60518 1105 aaKnown RBP23.96■■□□□ 1.43
CRAT-207ENST00000458362 AIDAQ96BJ3 306 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 BPIFA3Q9BQP9 254 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 CHD4Q14839 1912 aa23.96■■□□□ 1.43
CRAT-207ENST00000458362 UBE2Q2LH0YL09 131 aa23.95■■□□□ 1.43
CRAT-207ENST00000458362 NTRK3Q16288 839 aa23.95■■□□□ 1.43
CRAT-207ENST00000458362 ZNF34Q8IZ26 560 aa23.95■■□□□ 1.43
CRAT-207ENST00000458362 ANKRD7Q92527 254 aa23.95■■□□□ 1.43
CRAT-207ENST00000458362 LPIN2Q92539 896 aa23.95■■□□□ 1.43
CRAT-207ENST00000458362 DOCK2Q92608 1830 aa23.95■■□□□ 1.42
CRAT-207ENST00000458362 NLRP12P59046 1061 aa23.95■■□□□ 1.42
CRAT-207ENST00000458362 CTDSPL2Q05D32 466 aa23.95■■□□□ 1.42
CRAT-207ENST00000458362 RGS22Q8NE09 1264 aa23.95■■□□□ 1.42
CRAT-207ENST00000458362 TMEM87BQ96K49 555 aa23.95■■□□□ 1.42
CRAT-207ENST00000458362 ERVV-1B6SEH8 477 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 ZBTB43O43298 467 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 CDKL5O76039 1030 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 PTPAQ15257 358 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 ALX1Q15699 326 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 SPATA5Q8NB90 893 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 SYTL4Q96C24 671 aaPredicted RBP23.94■■□□□ 1.42
CRAT-207ENST00000458362 MBD4O95243 580 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 RASGRF1Q13972 1273 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 ZRSR1Q15695 479 aaKnown RBP23.94■■□□□ 1.42
CRAT-207ENST00000458362 TMEM67Q5HYA8 995 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 NFXL1Q6ZNB6 911 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 MAGEB6Q8N7X4 407 aa23.94■■□□□ 1.42
CRAT-207ENST00000458362 MROH5Q6ZUA9 1318 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 IFNL3Q8IZI9 196 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 GOLGA8AA7E2F4 631 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 NCAPHQ15003 741 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 SHC4Q6S5L8 630 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 MAP3K14Q99558 947 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 ARMT1Q9H993 441 aa23.93■■□□□ 1.42
CRAT-207ENST00000458362 PATL2C9JE40 543 aaKnown RBP23.92■■□□□ 1.42
CRAT-207ENST00000458362 ISM2Q6H9L7 571 aa23.92■■□□□ 1.42
CRAT-207ENST00000458362 SGMS1Q86VZ5 419 aa23.92■■□□□ 1.42
CRAT-207ENST00000458362 XPO4Q9C0E2 1151 aaKnown RBP23.92■■□□□ 1.42
CRAT-207ENST00000458362 IFNKQ9P0W0 207 aa23.92■■□□□ 1.42
CRAT-207ENST00000458362 ZSWIM5Q9P217 1185 aa23.92■■□□□ 1.42
CRAT-207ENST00000458362 IL6STP40189 918 aaPredicted RBP23.91■■□□□ 1.42
CRAT-207ENST00000458362 IARSP41252 1262 aaKnown RBP23.91■■□□□ 1.42
CRAT-207ENST00000458362 CEP135Q66GS9 1140 aa23.91■■□□□ 1.42
CRAT-207ENST00000458362 ZMYND15Q9H091 742 aa23.91■■□□□ 1.42
CRAT-207ENST00000458362 OSBPL5Q9H0X9 879 aaPredicted RBP23.91■■□□□ 1.42
CRAT-207ENST00000458362 HPSEQ9Y251 543 aa23.91■■□□□ 1.42
CRAT-207ENST00000458362 SUSD4Q5VX71 490 aa23.91■■□□□ 1.42
CRAT-207ENST00000458362 CPLX2Q6PUV4 134 aaKnown RBP23.91■■□□□ 1.42
CRAT-207ENST00000458362 SEC31BQ9NQW1 1179 aa23.91■■□□□ 1.42
CRAT-207ENST00000458362 PRKAB2O43741 272 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 SLC5A1P13866 664 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 SYKP43405 635 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 NCBP1Q09161 790 aaKnown RBP23.9■■□□□ 1.42
CRAT-207ENST00000458362 PPP4R3BQ5MIZ7 849 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 NYAP1Q6ZVC0 841 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 CLIC6Q96NY7 704 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 NAPBQ9H115 298 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 PAXBP1Q9Y5B6 917 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 TIAM2Q8IVF5 1701 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 PPP6R2O75170 966 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 SMC2O95347 1197 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 U2AF2P26368 475 aaKnown RBP eCLIP23.9■■□□□ 1.42
CRAT-207ENST00000458362 GNL2Q13823 731 aaKnown RBP23.9■■□□□ 1.42
CRAT-207ENST00000458362 PDCL2Q8N4E4 241 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 ZNF592Q92610 1267 aa23.9■■□□□ 1.42
CRAT-207ENST00000458362 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.9■■□□□ 1.42
CRAT-207ENST00000458362 TRMT1Q9NXH9 659 aaKnown RBP23.9■■□□□ 1.42
CRAT-207ENST00000458362 GSG1L2A8MUP6 293 aa23.89■■□□□ 1.42
CRAT-207ENST00000458362 IFIT3O14879 490 aaKnown RBP23.89■■□□□ 1.42
CRAT-207ENST00000458362 TIGD1Q96MW7 591 aa23.89■■□□□ 1.42
CRAT-207ENST00000458362 GSDMDP57764 484 aa23.89■■□□□ 1.41
CRAT-207ENST00000458362 MAP3K12Q12852 859 aa23.89■■□□□ 1.41
CRAT-207ENST00000458362 CCAR2Q8N163 923 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms