RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SCAND2PQ9GZW5 306 aaPredicted RBP13.73□□□□□ -0.21
SYNE2-207ENST00000458046 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
SYNE2-207ENST00000458046 PRDM4Q9UKN5 801 aa13.73□□□□□ -0.21
SYNE2-207ENST00000458046 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
SYNE2-207ENST00000458046 CYP21A2P08686 494 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 CEBPZQ03701 1054 aaKnown RBP13.72□□□□□ -0.21
SYNE2-207ENST00000458046 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 MKL1Q969V6 931 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
SYNE2-207ENST00000458046 PPFIA3O75145 1194 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 MAP9Q49MG5 647 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 BRF1Q92994 677 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 KCNF1Q9H3M0 494 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 PCDH12Q9NPG4 1184 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 PYCARDQ9ULZ3 195 aa13.72□□□□□ -0.21
SYNE2-207ENST00000458046 ELP1O95163 1332 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 NR1I2O75469 434 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 KRT32Q14532 448 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 MCMDC2Q4G0Z9 681 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 ANO6Q4KMQ2 910 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 FAM200AQ8TCP9 573 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 GTF3C6Q969F1 213 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 SPC25Q9HBM1 224 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 SLIT3O75094 1523 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 TNS2Q63HR2 1409 aa13.71□□□□□ -0.21
SYNE2-207ENST00000458046 FAM177BA6PVY3 158 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 H3BQV1 296 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 BICD2Q8TD16 824 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 PGBD1Q96JS3 809 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 CASZ1Q86V15 1759 aa13.71□□□□□ -0.22
SYNE2-207ENST00000458046 CYP27B1O15528 508 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 TIMM10P62072 90 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 RAD51AP2Q09MP3 1159 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 SETDB1Q15047 1291 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 ZNF609O15014 1411 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
SYNE2-207ENST00000458046 PHLDB3Q6NSJ2 640 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 MYRIPQ8NFW9 859 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 HAUS7Q99871 368 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 PAGR1Q9BTK6 254 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 CBX8Q9HC52 389 aa13.7□□□□□ -0.22
SYNE2-207ENST00000458046 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-207ENST00000458046 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-207ENST00000458046 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
SYNE2-207ENST00000458046 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-207ENST00000458046 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-207ENST00000458046 ANKRD33BA6NCL7 494 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 CABP4P57796 275 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 SCRN1Q12765 414 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 KIAA1524Q8TCG1 905 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 SPTLC3Q9NUV7 552 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-207ENST00000458046 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
SYNE2-207ENST00000458046 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 PTGS1P23219 599 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNE2-207ENST00000458046 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 DRC7Q8IY82 874 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 LRRC27Q9C0I9 530 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 CCT2P78371 535 aaKnown RBP13.68□□□□□ -0.22
SYNE2-207ENST00000458046 RESTQ13127 1097 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
SYNE2-207ENST00000458046 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
SYNE2-207ENST00000458046 DCAF5Q96JK2 942 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 MEGF6O75095 1541 aa13.68□□□□□ -0.22
SYNE2-207ENST00000458046 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 TTLL12Q14166 644 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 CHST3Q7LGC8 479 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 GOLGA6L6A8MZA4 724 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 CASP7P55210 303 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 NBPF14Q5TI25 921 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 TTC39BQ5VTQ0 682 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 KBTBD3Q8NAB2 608 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 PLBD2Q8NHP8 589 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 PRIMPOLQ96LW4 560 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 MRPL42Q9Y6G3 142 aaKnown RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 FOXO4P98177 505 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 CCDC186Q7Z3E2 898 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
SYNE2-207ENST00000458046 ZNF594Q96JF6 807 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-207ENST00000458046 TRIM5Q9C035 493 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms