RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 SHC4Q6S5L8 630 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 AIFM3Q96NN9 605 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 SPATA31A3Q5VYP0 1347 aa20.44■□□□□ 0.86
PTPN6-204ENST00000456013 MYO5AQ9Y4I1 1855 aaKnown RBP20.44■□□□□ 0.86
PTPN6-204ENST00000456013 CBFA2T2O43439 604 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 ATP1A3P13637 1013 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 MCAMP43121 646 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 MYL5Q02045 173 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 ISM2Q6H9L7 571 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 CYB5R4Q7L1T6 521 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 CPLX2Q6PUV4 134 aaKnown RBP20.43■□□□□ 0.86
PTPN6-204ENST00000456013 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 CCDC85AQ96PX6 553 aaPredicted RBP20.43■□□□□ 0.86
PTPN6-204ENST00000456013 MAP3K14Q99558 947 aa20.43■□□□□ 0.86
PTPN6-204ENST00000456013 UBASH3AP57075 661 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 RESP18Q5W5W9 173 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 FAM89AQ96GI7 184 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 ZNF512BQ96KM6 892 aaPredicted RBP20.42■□□□□ 0.86
PTPN6-204ENST00000456013 DENND2AQ9ULE3 1009 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 MYO1BO43795 1136 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 IGSF3O75054 1194 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 ZBTB38Q8NAP3 1195 aaPredicted RBP20.42■□□□□ 0.86
PTPN6-204ENST00000456013 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 SHANK3Q9BYB0 1731 aa20.42■□□□□ 0.86
PTPN6-204ENST00000456013 CDC27P30260 824 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 TTF1Q15361 905 aaPredicted RBP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 TMEM87BQ96K49 555 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 TMX1Q9H3N1 280 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 H2AFXP16104 143 aaPredicted RBP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 ETF1P62495 437 aaKnown RBP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 PNOCQ13519 176 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 GNL2Q13823 731 aaKnown RBP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 METTL24Q5JXM2 366 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 SLC9C2Q5TAH2 1124 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 DPF2Q92785 391 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.41■□□□□ 0.86
PTPN6-204ENST00000456013 PHLPP2Q6ZVD8 1323 aa20.41■□□□□ 0.86
PTPN6-204ENST00000456013 CUTAO60888 179 aa20.4■□□□□ 0.86
PTPN6-204ENST00000456013 SERPINC1P01008 464 aa20.4■□□□□ 0.86
PTPN6-204ENST00000456013 UBE3CQ15386 1083 aa20.4■□□□□ 0.86
PTPN6-204ENST00000456013 NTRK3Q16288 839 aa20.39■□□□□ 0.86
PTPN6-204ENST00000456013 ERCC6LQ2NKX8 1250 aa20.39■□□□□ 0.86
PTPN6-204ENST00000456013 TOM1L2Q6ZVM7 507 aa20.39■□□□□ 0.86
PTPN6-204ENST00000456013 OLFM4Q6UX06 510 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 ZNF771Q7L3S4 317 aaPredicted RBP20.39■□□□□ 0.85
PTPN6-204ENST00000456013 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 VSTM4Q8IW00 320 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 IGDCC4Q8TDY8 1250 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 PHKBQ93100 1093 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 SYTL4Q96C24 671 aaPredicted RBP20.39■□□□□ 0.85
PTPN6-204ENST00000456013 MYH3P11055 1940 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 CHD4Q14839 1912 aa20.39■□□□□ 0.85
PTPN6-204ENST00000456013 CDHR2Q9BYE9 1310 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 ZBTB43O43298 467 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 RXRAP19793 462 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 IARSP41252 1262 aaKnown RBP20.38■□□□□ 0.85
PTPN6-204ENST00000456013 METTL16Q86W50 562 aaKnown RBP20.38■□□□□ 0.85
PTPN6-204ENST00000456013 ELOA2Q8IYF1 753 aaPredicted RBP20.38■□□□□ 0.85
PTPN6-204ENST00000456013 ZNF446Q9NWS9 450 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 B4E1Z4 1266 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 TRIM29Q14134 588 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 CCDC102BQ68D86 513 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 LDHAL6AQ6ZMR3 332 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 KRBA2Q6ZNG9 492 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 SGMS1Q86VZ5 419 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 FCHSD1Q86WN1 690 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 MICU3Q86XE3 530 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 CLIC6Q96NY7 704 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
PTPN6-204ENST00000456013 SENP2Q9HC62 589 aa20.38■□□□□ 0.85
PTPN6-204ENST00000456013 TERF2Q15554 542 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 TRIM65Q6PJ69 517 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 LRRN4CLQ8ND94 238 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 PIH1D3Q9NQM4 214 aaKnown RBP20.37■□□□□ 0.85
PTPN6-204ENST00000456013 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 NPHP1O15259 732 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 APPP05067 770 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 LONRF3Q496Y0 759 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 FOXP4Q8IVH2 680 aaPredicted RBP20.37■□□□□ 0.85
PTPN6-204ENST00000456013 LY9Q9HBG7 655 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 FAM217BQ9NTX9 383 aaPredicted RBP20.37■□□□□ 0.85
PTPN6-204ENST00000456013 KCNH3Q9ULD8 1083 aa20.37■□□□□ 0.85
PTPN6-204ENST00000456013 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
PTPN6-204ENST00000456013 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 STK36Q9NRP7 1315 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 RANBP6O60518 1105 aaKnown RBP20.36■□□□□ 0.85
PTPN6-204ENST00000456013 TOP1P11387 765 aaKnown RBP20.36■□□□□ 0.85
PTPN6-204ENST00000456013 ITGA6P23229 1130 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 CNNM3Q8NE01 707 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 DNAI1Q9UI46 699 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 PCDHA5Q9Y5H7 936 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
PTPN6-204ENST00000456013 GOLGA8AA7E2F4 631 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms