RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 CLIC4Q9Y696 253 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 MORC2Q9Y6X9 1032 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 GNAT2P19087 354 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.088e-7■■■■□ 25.7
ECHDC1-209ENST00000454591 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 SYCP1Q15431 976 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 MPNDQ8N594 471 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 LY9Q9HBG7 655 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 IMPACTQ9P2X3 320 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 NAP1L2Q9ULW6 460 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 THRAP3Q9Y2W1 955 aaKnown RBP14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
ECHDC1-209ENST00000454591 KIF28PB7ZC32 967 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 CTIFO43310 598 aaKnown RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 METAP2P50579 478 aaKnown RBP eCLIP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 NDUFA8P51970 172 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 CHAF1AQ13111 956 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 C17orf53Q8N3J3 647 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 SPATA5Q8NB90 893 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 CCDC85AQ96PX6 553 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 OSBPL5Q9H0X9 879 aaPredicted RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
ECHDC1-209ENST00000454591 MYO1BO43795 1136 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 KCNJ6P48051 423 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 NLRP12P59046 1061 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 PTPAQ15257 358 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 JMYQ8N9B5 988 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 CACTINQ8WUQ7 758 aaKnown RBP14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 KRT23Q9C075 422 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 FAM217BQ9NTX9 383 aaPredicted RBP14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 TUBE1Q9UJT0 475 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 WWC3Q9ULE0 1092 aa14.53□□□□□ -0.08
ECHDC1-209ENST00000454591 BECN2A8MW95 431 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 IKBKBO14920 756 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 ZBTB22O15209 634 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 ZBTB43O43298 467 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 IDH1O75874 414 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 FOSBP53539 338 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 GSDMDP57764 484 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 SF3A1Q15459 793 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 KRT40Q6A162 431 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 INTS5Q6P9B9 1019 aaKnown RBP14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 LRRC8AQ8IWT6 810 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 IFNL3Q8IZI9 196 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 STAG1Q8WVM7 1258 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 WASF1Q92558 559 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 AIDAQ96BJ3 306 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 ALG1Q9BT22 464 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 EPB41L4AQ9HCS5 686 aaPredicted RBP14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 NRBP1Q9UHY1 535 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 DLEC1Q9Y238 1755 aa14.52□□□□□ -0.08
ECHDC1-209ENST00000454591 ZNF202O95125 648 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 IFNAR1P17181 557 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 RASGRF1Q13972 1273 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 AKNAD1Q5T1N1 836 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 DRC7Q8IY82 874 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC144CPQ8IYA2 1237 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 MAP3K14Q99558 947 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 SDF4Q9BRK5 362 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 UTP14AQ9BVJ6 771 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 MYH14Q7Z406 1995 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CASZ1Q86V15 1759 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 SMTNL1A8MU46 457 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 GSG1L2A8MUP6 293 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 B4E1Z4 1266 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CUTAO60888 179 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CAMTA2O94983 1202 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 FMNL1O95466 1100 aaPredicted RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 SLC3A2P08195 630 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 PFKFB1P16118 471 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CDC27P30260 824 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 CCDC152Q4G0S7 254 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 SUSD4Q5VX71 490 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 TMTC2Q8N394 836 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 NOL10Q9BSC4 688 aaKnown RBP14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 FAM13BQ9NYF5 915 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 ANAPC4Q9UJX5 808 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 ZNF804BA4D1E1 1349 aa14.51□□□□□ -0.09
ECHDC1-209ENST00000454591 SCN7AQ01118 1682 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 NTSR2O95665 410 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 IARSP41252 1262 aaKnown RBP14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 LRMPQ12912 555 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 RESP18Q5W5W9 173 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 AOPEPQ8N6M6 819 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 NKX2-3Q8TAU0 364 aa14.5□□□□□ -0.09
ECHDC1-209ENST00000454591 NAPBQ9H115 298 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms