RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 CDC42EP5Q6NZY7 148 aa16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 ZNF70Q9UC06 446 aaPredicted RBP16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 MYH1P12882 1939 aa16.09■□□□□ 0.17
HLA-DOB-207ENST00000447394 BAZ2AQ9UIF9 1905 aaKnown RBP16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 ADD2P35612 726 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 PRAMEF18Q5VWM3 479 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 USP48Q86UV5 1035 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 KBTBD3Q8NAB2 608 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 SH3RF3Q8TEJ3 882 aaPredicted RBP16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 FSD1Q9BTV5 496 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 PGAP2Q9UHJ9 254 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
HLA-DOB-207ENST00000447394 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 MMP14P50281 582 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 GSTO1P78417 241 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 NFIAQ12857 509 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 CNTROBQ8N137 903 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 SMC1BQ8NDV3 1235 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 MRIQ9BWK5 157 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 USP40Q9NVE5 1235 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
HLA-DOB-207ENST00000447394 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
HLA-DOB-207ENST00000447394 RHBDL3P58872 404 aa16.06■□□□□ 0.16
HLA-DOB-207ENST00000447394 KRT26Q7Z3Y9 468 aa16.06■□□□□ 0.16
HLA-DOB-207ENST00000447394 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
HLA-DOB-207ENST00000447394 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
HLA-DOB-207ENST00000447394 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 MYO1BO43795 1136 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 LDHCP07864 332 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 SLF2Q8IX21 1173 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 LCORLQ8N3X6 602 aa16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 DDX4Q9NQI0 724 aaKnown RBP16.05■□□□□ 0.16
HLA-DOB-207ENST00000447394 M0R2C6 588 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 WDHD1O75717 1129 aaPredicted RBP16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 TCP10Q12799 353 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 PICALMQ13492 652 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 ZFPM1Q8IX07 1006 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 SEC62Q99442 399 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 PUS7LQ9H0K6 701 aaKnown RBP16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 ARMT1Q9H993 441 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 PAPPA2Q9BXP8 1791 aa16.04■□□□□ 0.16
HLA-DOB-207ENST00000447394 LAMB1P07942 1786 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 RNF113AO15541 343 aaKnown RBP16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 MBD4O95243 580 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 SDSP20132 328 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 TEX11Q8IYF3 940 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 CDCA5Q96FF9 252 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 FAM198AQ9UFP1 575 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
HLA-DOB-207ENST00000447394 PASKQ96RG2 1323 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 MAGEB6P1A0A0J9YX57 407 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 RASA3Q14644 834 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 UBE3CQ15386 1083 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 CDC37L1Q7L3B6 337 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 DEFB129Q9H1M3 183 aa16.02■□□□□ 0.16
HLA-DOB-207ENST00000447394 A0A0D9SFI3 127 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 PRKAB2O43741 272 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 PPP4CP60510 307 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 FSTL1Q12841 308 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 NMIQ13287 307 aaPredicted RBP16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 ZSCAN25Q6NSZ9 544 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 CCDC129Q6ZRS4 1044 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 MAPKAPK5Q8IW41 473 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 APPBP2Q92624 585 aa16.01■□□□□ 0.15
HLA-DOB-207ENST00000447394 BAG3O95817 575 aa16■□□□□ 0.15
HLA-DOB-207ENST00000447394 SLURP2P0DP57 97 aa16■□□□□ 0.15
HLA-DOB-207ENST00000447394 ZMYM1Q5SVZ6 1142 aa16■□□□□ 0.15
HLA-DOB-207ENST00000447394 NBPF12Q5TAG4 269 aaPredicted RBP16■□□□□ 0.15
HLA-DOB-207ENST00000447394 SH3BP5LQ7L8J4 393 aa16■□□□□ 0.15
HLA-DOB-207ENST00000447394 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
HLA-DOB-207ENST00000447394 TEPSINQ96N21 525 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms