RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 C4AP0C0L4 1744 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 C4BP0C0L5 1744 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 SYKP43405 635 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 APOA5Q6Q788 366 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 TMC6Q7Z403 805 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 NLRP10Q86W26 655 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 AIFM3Q96NN9 605 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 CGNQ9P2M7 1197 aaKnown RBP19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 AKAP11Q9UKA4 1901 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 TBC1D2BQ9UPU7 963 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 NRDCO43847 1150 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 PPP6R2O75170 966 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 CTSWP56202 376 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 KRT40Q6A162 431 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 KIF18AQ8NI77 898 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 TMEM87BQ96K49 555 aa19.09■□□□□ 0.65
SEMA3B-207ENST00000441915 SHANK3Q9BYB0 1731 aa19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 ZNF532Q9HCE3 1301 aa19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 PDE8BO95263 885 aa19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 RXRAP19793 462 aa19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 SFPQP23246 707 aaKnown RBP eCLIP19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 MICU3Q86XE3 530 aa19.08■□□□□ 0.65
SEMA3B-207ENST00000441915 MROH7-TTC4A0A0A0MT08 1334 aa19.08■□□□□ 0.64
SEMA3B-207ENST00000441915 HLFQ16534 295 aa19.08■□□□□ 0.64
SEMA3B-207ENST00000441915 PIH1D3Q9NQM4 214 aaKnown RBP19.08■□□□□ 0.64
SEMA3B-207ENST00000441915 B4E1Z4 1266 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 IKBKBO14920 756 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 NAA30Q147X3 362 aaPredicted RBP19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 NCAPHQ15003 741 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 VGLL2Q8N8G2 317 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 PIGBQ92521 554 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 ZBTB43O43298 467 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 TRIM29Q14134 588 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 NFXL1Q6ZNB6 911 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 PHKBQ93100 1093 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 AIDAQ96BJ3 306 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 GTPBP4Q9BZE4 634 aaKnown RBP19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 TAOK2Q9UL54 1235 aa19.07■□□□□ 0.64
SEMA3B-207ENST00000441915 IRS4O14654 1257 aaPredicted RBP19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 PDE6AP16499 860 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 CDC27P30260 824 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 IARSP41252 1262 aaKnown RBP19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 CCDC102BQ68D86 513 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 HPSEQ9Y251 543 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 ISM2Q6H9L7 571 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
SEMA3B-207ENST00000441915 KIF20AO95235 890 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 UQCRFS1P1P0C7P4 283 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 LMOD1P29536 600 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 ARMCX5Q6P1M9 558 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 NKX2-3Q8TAU0 364 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 ZNF215Q9UL58 517 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 SOS2Q07890 1332 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 ARID4AP29374 1257 aaPredicted RBP19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 PTPAQ15257 358 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 SHC4Q6S5L8 630 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
SEMA3B-207ENST00000441915 PHKA1P46020 1223 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 FANCCQ00597 558 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 E4F1Q66K89 784 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 SGMS1Q86VZ5 419 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 BBXQ8WY36 941 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 SENP2Q9HC62 589 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 PSDA5PKW4 1024 aaPredicted RBP19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 GOLGA8AA7E2F4 631 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 KCNJ6P48051 423 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 NTRK3Q16288 839 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 TMEM67Q5HYA8 995 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 OGFRQ9NZT2 677 aa19.04■□□□□ 0.64
SEMA3B-207ENST00000441915 PDE8AO60658 829 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 ERO1AQ96HE7 468 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 MAP3K14Q99558 947 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 LY9Q9HBG7 655 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 FAM237AA0A1B0GTK4 181 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 TCRBV5S4A2TA0A5A2 114 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 LPIN2Q92539 896 aa19.03■□□□□ 0.64
SEMA3B-207ENST00000441915 LIFRP42702 1097 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 MYL5Q02045 173 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 PUM3Q15397 648 aaKnown RBP19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 ALX1Q15699 326 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 RESP18Q5W5W9 173 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 BCL11BQ9C0K0 894 aaPredicted RBP19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 SLC12A7Q9Y666 1083 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 MYH3P11055 1940 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 MYO5AQ9Y4I1 1855 aaKnown RBP19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 PPP1R13BQ96KQ4 1090 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 NAPBQ9H115 298 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 UBN2Q6ZU65 1347 aa19.02■□□□□ 0.64
SEMA3B-207ENST00000441915 CBFA2T2O43439 604 aa19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 RANBP6O60518 1105 aaKnown RBP19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 CUTAO60888 179 aa19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 SLU7O95391 586 aaKnown RBP19.02■□□□□ 0.63
SEMA3B-207ENST00000441915 ATP1A3P13637 1013 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms