RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 GRIK5Q16478 980 aa14.26□□□□□ -0.13
IRF1-204ENST00000439555 ATP2B3Q16720 1220 aa14.26□□□□□ -0.13
IRF1-204ENST00000439555 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
IRF1-204ENST00000439555 TEPSINQ96N21 525 aa14.26□□□□□ -0.13
IRF1-204ENST00000439555 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
IRF1-204ENST00000439555 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
IRF1-204ENST00000439555 APOBEC3HQ6NTF7 200 aaKnown RBP14.25□□□□□ -0.13
IRF1-204ENST00000439555 FAM83AQ86UY5 434 aa14.25□□□□□ -0.13
IRF1-204ENST00000439555 MIER1Q8N108 512 aa14.25□□□□□ -0.13
IRF1-204ENST00000439555 SIL1Q9H173 461 aa14.25□□□□□ -0.13
IRF1-204ENST00000439555 PTCH2Q9Y6C5 1203 aa14.25□□□□□ -0.13
IRF1-204ENST00000439555 COL6A3P12111 3177 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
IRF1-204ENST00000439555 TMOD2Q9NZR1 351 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 DENND2AQ9ULE3 1009 aa14.24□□□□□ -0.13
IRF1-204ENST00000439555 TCP10L2B9ZVM9 353 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 SRGAP3O43295 1099 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
IRF1-204ENST00000439555 BCAR3O75815 825 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 GNAI2P04899 355 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 GTF2A2P52657 109 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 OPTNQ96CV9 577 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 PRO3102Q9H379 93 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 PA2G4Q9UQ80 394 aaKnown RBP14.23□□□□□ -0.13
IRF1-204ENST00000439555 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
IRF1-204ENST00000439555 RANBP2P49792 3224 aaKnown RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 PDS5AQ29RF7 1337 aaKnown RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 A0A1W2PPC1 479 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 CAPN2P17655 700 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
IRF1-204ENST00000439555 TAF1CQ15572 869 aaPredicted RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 CHRDL2Q6WN34 429 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 ZGPATQ8N5A5 531 aaKnown RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
IRF1-204ENST00000439555 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
IRF1-204ENST00000439555 ARAP2Q8WZ64 1704 aa14.21□□□□□ -0.13
IRF1-204ENST00000439555 TLR2O60603 784 aa14.21□□□□□ -0.13
IRF1-204ENST00000439555 MAP3K9P80192 1104 aa14.21□□□□□ -0.13
IRF1-204ENST00000439555 KIF22Q14807 665 aa14.21□□□□□ -0.13
IRF1-204ENST00000439555 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
IRF1-204ENST00000439555 MGAMO43451 1857 aa14.21□□□□□ -0.14
IRF1-204ENST00000439555 A0A0C4DFX4 3053 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 CCL15-CCL14A0A0B4J2E2 113 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 LDHBP07195 334 aaKnown RBP14.2□□□□□ -0.14
IRF1-204ENST00000439555 PHKA1P46020 1223 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 MVPQ14764 893 aaKnown RBP14.2□□□□□ -0.14
IRF1-204ENST00000439555 CCL15Q16663 113 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.2□□□□□ -0.14
IRF1-204ENST00000439555 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.2□□□□□ -0.14
IRF1-204ENST00000439555 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 DPF3Q92784 378 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 HTATIP2Q9BUP3 242 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
IRF1-204ENST00000439555 ZSWIM8A7E2V4 1837 aa14.2□□□□□ -0.14
IRF1-204ENST00000439555 A0A1B0GUL7 405 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 PRDX5P30044 214 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 TIMM10P62072 90 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 LACTBP83111 547 aaPredicted RBP14.19□□□□□ -0.14
IRF1-204ENST00000439555 DCAF15Q66K64 600 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 UBE2Q1Q7Z7E8 422 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 FAM151AQ8WW52 585 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 CLUAP1Q96AJ1 413 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 FAM163AQ96GL9 167 aaPredicted RBP14.19□□□□□ -0.14
IRF1-204ENST00000439555 ELP3Q9H9T3 547 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
IRF1-204ENST00000439555 DAGLAQ9Y4D2 1042 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 CSADQ9Y600 493 aa14.19□□□□□ -0.14
IRF1-204ENST00000439555 ADORA1P30542 326 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
IRF1-204ENST00000439555 CACNB3P54284 484 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 TFCP2Q12800 502 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 VGLL4Q14135 290 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 SPTY2D1Q68D10 685 aaPredicted RBP14.18□□□□□ -0.14
IRF1-204ENST00000439555 CDC42EP5Q6NZY7 148 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 SLF2Q8IX21 1173 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 TMEM57Q8N5G2 664 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 XAGE2Q96GT9 111 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 NR2E3Q9Y5X4 410 aa14.18□□□□□ -0.14
IRF1-204ENST00000439555 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
IRF1-204ENST00000439555 GJA8P48165 433 aa14.17□□□□□ -0.14
IRF1-204ENST00000439555 G3BP1Q13283 466 aaKnown RBP eCLIP14.17□□□□□ -0.14
IRF1-204ENST00000439555 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
IRF1-204ENST00000439555 SH3TC2Q8TF17 1288 aa14.17□□□□□ -0.14
IRF1-204ENST00000439555 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
IRF1-204ENST00000439555 PNMA6EA0A0J9YXQ4 647 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 SPDYE5A6NIY4 337 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 GJB1P08034 283 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 CETPP11597 493 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 HOXD10P28358 340 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 POLA2Q14181 598 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 DIXDC1Q155Q3 683 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 GPR153Q6NV75 609 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms