RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 SAFBQ15424 915 aaKnown RBP eCLIP18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 APOA5Q6Q788 366 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 PCDHA7Q9UN72 937 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 SLC12A7Q9Y666 1083 aa18.24■□□□□ 0.51
RBFOX1-205ENST00000436368 TDO2P48775 406 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 SNW1Q13573 536 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 PPP2R5BQ15173 497 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 GLIPR1L2Q4G1C9 344 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 AKNAD1Q5T1N1 836 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 TRIM22Q8IYM9 498 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 IFNL3Q8IZI9 196 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 FMR1NBQ8N0W7 255 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 KIAA1524Q8TCG1 905 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 TIGD1Q96MW7 591 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 BPIFA3Q9BQP9 254 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 PPP6R2O75170 966 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 CMA1P23946 247 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 SSRP1Q08945 709 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 RASGRF1Q13972 1273 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 SPC24Q8NBT2 197 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 STAG1Q8WVM7 1258 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 GOLPH3LQ9H4A5 285 aa18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 HOOK1Q9UJC3 728 aaKnown RBP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
RBFOX1-205ENST00000436368 B4E1Z4 1266 aa18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 NTSR2O95665 410 aa18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 PCP11498 1178 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 GPHNQ9NQX3 736 aaPredicted RBP18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
RBFOX1-205ENST00000436368 A0A0G2JS52 829 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 NRDCO43847 1150 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 SLC39A14Q15043 492 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 MYRIPQ8NFW9 859 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 NBPF3Q9H094 633 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 LRP2BPQ9P2M1 347 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 ZNF831Q5JPB2 1677 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
RBFOX1-205ENST00000436368 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 IGSF3O75054 1194 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 IQCB1Q15051 598 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 SLC4A4Q9Y6R1 1079 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 NEDD4P46934 1319 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
RBFOX1-205ENST00000436368 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 SEMA3EO15041 775 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 AP5Z1O43299 807 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 MYO1BO43795 1136 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 FMNL1O95466 1100 aaPredicted RBP18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 SLC3A2P08195 630 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 C4AP0C0L4 1744 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 C4BP0C0L5 1744 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 GSDMDP57764 484 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 UBE4AQ14139 1066 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 CAVIN4Q5BKX8 364 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 KRT40Q6A162 431 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 ANKRD18AQ8IVF6 992 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 IGDCC4Q8TDY8 1250 aa18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 FTOQ9C0B1 505 aaKnown RBP eCLIP18.19■□□□□ 0.5
RBFOX1-205ENST00000436368 POLR3DP05423 398 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 IFNAR1P17181 557 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 NT5C2P49902 561 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 WTAPQ15007 396 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CCDC186Q7Z3E2 898 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 HELBQ8NG08 1087 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CCDC34Q96HJ3 373 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 KIAA1468Q9P260 1216 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CLIC4Q9Y696 253 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CUTAO60888 179 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 XBP1P17861 261 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 PTGS1P23219 599 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CHRNDQ07001 517 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 RTN1Q16799 776 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 UBAC1Q9BSL1 405 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 ARMT1Q9H993 441 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 CEP131Q9UPN4 1083 aa18.18■□□□□ 0.5
RBFOX1-205ENST00000436368 PDS5AQ29RF7 1337 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-205ENST00000436368 GSG1L2A8MUP6 293 aa18.17■□□□□ 0.5
RBFOX1-205ENST00000436368 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.5
RBFOX1-205ENST00000436368 NDUFA8P51970 172 aa18.17■□□□□ 0.5
RBFOX1-205ENST00000436368 NLRP12P59046 1061 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms