RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 HPSEQ9Y251 543 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 ECM29Q5VYK3 1845 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 MYH3P11055 1940 aa13.32□□□□□ -0.28
LINC01238-203ENST00000429456 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
LINC01238-203ENST00000429456 BIN1O00499 593 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 PPP6R2O75170 966 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 CDKL5O76039 1030 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 SMC2O95347 1197 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 TPM4P67936 248 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 DMTNQ08495 405 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
LINC01238-203ENST00000429456 KRT40Q6A162 431 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 ANKRD18BA2A2Z9 1011 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 KIF2AO00139 706 aaPredicted RBP13.31□□□□□ -0.28
LINC01238-203ENST00000429456 IKBKBO14920 756 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
LINC01238-203ENST00000429456 CDC27P30260 824 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 CTSWP56202 376 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
LINC01238-203ENST00000429456 PTPAQ15257 358 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 HLFQ16534 295 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 ARMCX5Q6P1M9 558 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 VPS37DQ86XT2 251 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
LINC01238-203ENST00000429456 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-203ENST00000429456 ZNF532Q9HCE3 1301 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 KCNJ6P48051 423 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 MAP3K14Q99558 947 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 CNNM1Q9NRU3 951 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 ANKRD36CQ5JPF3 1778 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 STARD3NLO95772 234 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 PDE6AP16499 860 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 ARID4AP29374 1257 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-203ENST00000429456 SYKP43405 635 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 NTRK3Q16288 839 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 E4F1Q66K89 784 aaPredicted RBP13.3□□□□□ -0.28
LINC01238-203ENST00000429456 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
LINC01238-203ENST00000429456 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 KIF18AQ8NI77 898 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 IGDCC4Q8TDY8 1250 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 PIGBQ92521 554 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 HSD3B7Q9H2F3 369 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
LINC01238-203ENST00000429456 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
LINC01238-203ENST00000429456 B4E1Z4 1266 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 IDH1O75874 414 aaKnown RBP13.29□□□□□ -0.28
LINC01238-203ENST00000429456 PDE8BO95263 885 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 APPP05067 770 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 GPTP24298 496 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 ALX1Q15699 326 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 SGMS1Q86VZ5 419 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 OGFRQ9NZT2 677 aa13.29□□□□□ -0.28
LINC01238-203ENST00000429456 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
LINC01238-203ENST00000429456 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.29□□□□□ -0.28
LINC01238-203ENST00000429456 ZBTB43O43298 467 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 RXRAP19793 462 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 SFPQP23246 707 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 PHKA1P46020 1223 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 FANCCQ00597 558 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 CCDC102BQ68D86 513 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 PHKBQ93100 1093 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 STRBPQ96SI9 672 aaKnown RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 FAM217BQ9NTX9 383 aaPredicted RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 WWC3Q9ULE0 1092 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 IRS4O14654 1257 aaPredicted RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 UQCRFS1P1P0C7P4 283 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 PPP1R13BQ96KQ4 1090 aa13.28□□□□□ -0.28
LINC01238-203ENST00000429456 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.28□□□□□ -0.28
LINC01238-203ENST00000429456 LRP6O75581 1613 aa13.27□□□□□ -0.28
LINC01238-203ENST00000429456 ITGB4P16144 1822 aa13.27□□□□□ -0.28
LINC01238-203ENST00000429456 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.28
LINC01238-203ENST00000429456 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.28
LINC01238-203ENST00000429456 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.28
LINC01238-203ENST00000429456 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.28
LINC01238-203ENST00000429456 CHD4Q14839 1912 aa13.27□□□□□ -0.28
LINC01238-203ENST00000429456 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 PDE8AO60658 829 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 CUTAO60888 179 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 FGFR2P21802 821 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 LIFRP42702 1097 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms