RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 BICC1Q9H694 974 aaKnown RBP16.44■□□□□ 0.22
SYNGAP1-203ENST00000428982 FBXW10Q5XX13 1052 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 PDILTQ8N807 584 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 CCT5P48643 541 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 BRD3Q15059 726 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 MIEF2Q96C03 454 aa16.43■□□□□ 0.22
SYNGAP1-203ENST00000428982 CPDO75976 1380 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 SF3B2Q13435 895 aaKnown RBP16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 PAX7P23759 505 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 RWDD2BP57060 319 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 MRFAP1L1Q96HT8 127 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 CYP27B1O15528 508 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 UBE3BQ7Z3V4 1068 aa16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 THRAP3Q9Y2W1 955 aaKnown RBP16.42■□□□□ 0.22
SYNGAP1-203ENST00000428982 GRM8O00222 908 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 CRB1P82279 1406 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 CCDC70Q6NSX1 233 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 ANO10Q9NW15 660 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 ZPR1O75312 459 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 ETAA1Q9NY74 926 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 NALCNQ8IZF0 1738 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 CREB3L3Q68CJ9 461 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 FAM71BQ8TC56 605 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 DYDC1Q8WWB3 177 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 CNNM1Q9NRU3 951 aa16.41■□□□□ 0.22
SYNGAP1-203ENST00000428982 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 JCADQ9P266 1359 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 TRAF1Q13077 416 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 MAP9Q49MG5 647 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 GOLGA6L10A6NI86 522 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 STX1AQ16623 288 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 ITFG2Q969R8 447 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 FAM204AQ9H8W3 233 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 GPTP24298 496 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 B4GALNT4Q76KP1 1039 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 CCDC97Q96F63 343 aaPredicted RBP16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 FAM53CQ9NYF3 392 aa16.4■□□□□ 0.22
SYNGAP1-203ENST00000428982 APOBRQ0VD83 1088 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 POLA2Q14181 598 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC12Q8WUD4 166 aaPredicted RBP16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 RABEP2Q9H5N1 569 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 ATL3Q6DD88 541 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 SYNE3Q6ZMZ3 975 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 SAAL1Q96ER3 474 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
SYNGAP1-203ENST00000428982 GOLGA6L9A6NEM1 432 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CPLX1O14810 134 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 PARD6BQ9BYG5 372 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 FAM169AQ9Y6X4 670 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 STK3Q13188 491 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 ARID5BQ14865 1188 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CWF19L2Q2TBE0 894 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 HOOK1Q9UJC3 728 aaKnown RBP16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 FAM76AQ8TAV0 307 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 BOLA2Q9H3K6 86 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC151A5D8V7 595 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CDC25BP30305 580 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 ARHGAP25P42331 645 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CRYMQ14894 314 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC181Q5TID7 509 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 NYAP1Q6ZVC0 841 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 TRPC5Q9UL62 973 aaPredicted RBP16.38■□□□□ 0.21
SYNGAP1-203ENST00000428982 NWD1Q149M9 1564 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 AP5Z1O43299 807 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 SCRN1Q12765 414 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 TBC1D8O95759 1140 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 SERPINC1P01008 464 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 A1BGP04217 495 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 TDRD7Q8NHU6 1098 aaKnown RBP16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 NEK1Q96PY6 1258 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 MPHOSPH8Q99549 860 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 FOXR1Q6PIV2 292 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC50Q8IVM0 306 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC114Q96M63 670 aa16.37■□□□□ 0.21
SYNGAP1-203ENST00000428982 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms