RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 INF2Q27J81 1249 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 FRMD4BQ9Y2L6 1034 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 M0QZ92 97 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 SMTNP53814 917 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 CNBD1Q8NA66 436 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 PAG1Q9NWQ8 432 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC160A6NGH7 325 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 PPFIA3O75145 1194 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 FAM204AQ9H8W3 233 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 MTUS1Q9ULD2 1270 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 E7EVH7 732 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 DKC1O60832 514 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 EIF6P56537 245 aaKnown RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 GABPAQ06546 454 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 BIRC3Q13489 604 aa10.06□□□□□ -0.8
CTNND1-208ENST00000428599 SPOUT1Q5T280 376 aaKnown RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 TRIM6Q9C030 488 aaPredicted RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 MTRF1LQ9UGC7 380 aaKnown RBP10.06□□□□□ -0.8
CTNND1-208ENST00000428599 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 STK10O94804 968 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 TFCP2Q12800 502 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 FAM89AQ96GI7 184 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 DAPK3O43293 454 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 TERF1P54274 439 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 UVSSAQ2YD98 709 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CDAN1Q8IWY9 1227 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC114Q96M63 670 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 SELENOSQ9BQE4 189 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CSRNP2Q9H175 543 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 ZSWIM4Q9H7M6 989 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 NOP56O00567 594 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 SSFA2P28290 1259 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CUL4BQ13620 913 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 SEL1L2Q5TEA6 688 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 MSL1Q68DK7 614 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 PLBD2Q8NHP8 589 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 GSDMBQ8TAX9 411 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 NSMCE1Q8WV22 266 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 MRPS27Q92552 414 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 IFT74Q96LB3 600 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 PTPRTO14522 1441 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 KRT86O43790 486 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 ADCY5O95622 1261 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 KRT5P13647 590 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 ARID4AP29374 1257 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 STRN3Q13033 797 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 TCIRG1Q13488 830 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 G2E3Q7L622 706 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 PAXBP1Q9Y5B6 917 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 TRPC3Q13507 836 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 DHX58Q96C10 678 aa10.05□□□□□ -0.8
CTNND1-208ENST00000428599 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
CTNND1-208ENST00000428599 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 CEP128Q6ZU80 1094 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC42Q96M95 316 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 TMEM94Q12767 1356 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 HARSP12081 509 aaKnown RBP10.04□□□□□ -0.8
CTNND1-208ENST00000428599 RLBP1P12271 317 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.85e-6■■■□□ 17.8
CTNND1-208ENST00000428599 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 FAM184BQ9ULE4 1060 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 GIPC1O14908 333 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 A1BGP04217 495 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC125Q86Z20 511 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 NOX5Q96PH1 765 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 EXOC7Q9UPT5 735 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 NPC1L1Q9UHC9 1359 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-208ENST00000428599 PTGS1P23219 599 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 RAB3GAP1Q15042 981 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 CCDC65Q8IXS2 484 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 AFAP1L2Q8N4X5 818 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 BABAM1Q9NWV8 329 aa10.04□□□□□ -0.8
CTNND1-208ENST00000428599 RBM8AQ9Y5S9 174 aaKnown RBP10.04□□□□□ -0.8
CTNND1-208ENST00000428599 EPB41P11171 864 aaKnown RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 HECW2Q9P2P5 1572 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 PLEKHG1Q9ULL1 1385 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-208ENST00000428599 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 PPP1R9BQ96SB3 815 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 MAST3O60307 1309 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
CTNND1-208ENST00000428599 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms